Manes.01G015400.1.v6.1 (mRNA)

Overview
NameManes.01G015400.1
Unique NameManes.01G015400.1.v6.1
TypemRNA
OrganismManihot esculenta (Cassava)
Sequence length4247
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chromosome01chromosomeChromosome01:2502672..2506918 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Manihot esculenta (JGI)2015-07-22
Properties
Property NameValue
Pacid32360119
Longest1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Manes.01G015400Manes.01G015400.v6.1Manihot esculentagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Manes.01G015400.1Manes.01G015400.1.v6.1-proteinManihot esculentapolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Manes.01G015400.1.v6.1.CDS.5Manes.01G015400.1.v6.1.CDS.5Manihot esculentaCDS
Manes.01G015400.1.v6.1.CDS.4Manes.01G015400.1.v6.1.CDS.4Manihot esculentaCDS
Manes.01G015400.1.v6.1.CDS.3Manes.01G015400.1.v6.1.CDS.3Manihot esculentaCDS
Manes.01G015400.1.v6.1.CDS.2Manes.01G015400.1.v6.1.CDS.2Manihot esculentaCDS
Manes.01G015400.1.v6.1.CDS.1Manes.01G015400.1.v6.1.CDS.1Manihot esculentaCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Manes.01G015400.1.v6.1 ID=Manes.01G015400.1.v6.1|Name=Manes.01G015400.1|organism=Manihot esculenta|type=mRNA|length=4247bp
CTACTTCTTAGTAGATGCCTCAACCAGGGAGAGAATATGCAATGCGATTT
CTGCAGAGGCATCTGGCTTTGCAGCTTTTAGAGCCCTTTCTGACATATCT
GCCATTACATCCTTGTCTCCTGCTACAGCAACCATATAATTATTTTTCAG
TTACAAAATGAAATTATTCAAAGTGTAAATTTACTATAATACATCTAGCA
TTATAATTGTATGCAAAATATTATTTAAAAAATAAAAATAAAAACTACAA
AAAGAAATTGACAATGTGAAGATCCTATTACATAAATTTCCCGAAACATC
TGCACTGACCCAAGGAATTTAACTGATTCCAGTACCTTTTCAGTTGGTAA
CAGTTGGTAAGGAAGTTGTTAGATAAGGATAGGCCACTACCTTATCCTTC
ATAACATCTAGATATACCTTTAGGATTCATCAAATTCTCATAATTTTGCA
GAAAAAGCTTAGCACATTACATGTCTTGCATACAAATTACTAATTTTGTT
GGGCTCATGGTCTAAAATGAACTTGGCAAGCTTTTCCAGTTGTAGCCTAT
TCAAGTTACTTCACAATTTACTGATTTTGTTTCATTTGTATTCGATGGAT
ATGGGCATTCCCAAATATTGATGTTTTGTTGAGATGAAAGGCAAAAATGT
ACATAACTTCTGGTTGAGGGAAATAAAAGGAGAAAGATTTAGAAAAAAAA
AGGTTGATTCAAATAAAATTACTGCTATACTTTCCACTTGCCTATACGCA
AAGTAAAAGCAAATTTCATCACCTAACATTGGCTAAAATATCCCAGTTAC
CATCTTGTTAATACATATGTTCCCTTTTCTTGCTCCTTAAAAAATTATAT
TTTTCATGCAGCTGAAAAAATTTCCAAAGAGCCATGCATGTATGAGGTTG
AGTTCTCATATTTCATGGGCAAAGAAACCATTTGAAGCAAAAATTATTTA
AATAGCCACTTTTTCTTTCATTTCTTCCCCTATCGGGCAGAATAAATAAG
CAACATGTTTAACTTACCTATAATCTCTTCAATTGTGGCTCCCAAGGTAG
TTGAATCTAGCTCATCTTCAGTTATAACCCTCGTACCTGCTACATCTGCC
ATTAGCGAAGCATTTCTTAGTTGATGTCCTTCCTCTAGATTTGGTGATGG
TATCTGCAAAGTAGAGTGATATTATGTCTTCAAGCAATATAACCAACCTA
ACAGTTGACAATTTGGGCAAAGTAAAAGCTGAATGGATAGCTTGATCATA
AAGAAGTGATATGGATTTGAATTTATATGAAGTCAAGCATCAGAGTGCAC
ACAAAAAGAAATACGAAGCCTTAATGCATTTAAGAACATCTCAACATCCA
TCATGAAAACCAATGTCAATTGGGCTCCTAGTTTCATATTCTGATACAAA
AGAGCTCAATTGTTCAAACTTATGCTGGTGGTGGCACTGGCTTGATACTC
TTAACAACAAAATCCCACAGTCTACAATTTTAGGATGAAACTTGTTAGAG
TCTTACGCATAAAAAATACATGGTTATAATATCTTCAGAGACAAATTAGT
ACAGATTAACATACGCAATCGCATAACTAACCATATTGTTCTTTCATCCA
CTCTTTTATGATTGCTGTGAAATATTTATTTGCCTTTGTGATTATGCAAC
ATGGAACTCCTTAACTTACGCGATGCAAATTTTGCTTTAGGGGGGTTTCC
AATATCATCAAACCCTTTATTAGCAGTAAACTTATAATTTACATATATAT
ACACATGGATTAATGATTTCTCTGCTTTTGGGATGCTTAAAAAATAAAAT
ATAGAAATTTATCTATCAATAAACTTTGAGTACCAGGGCTGTAATAAAAG
ATGTATGTTACAAACGTCAACAGAAGATGATTAACCCCTAATTCACATCT
TTCTTCAGTTTCTACTTTTTTGAAATGGTCAAATTAATGTCCATGAAGAA
AATCCTTGAATTGCTTCCACTAGCAGTGTGGAATTAGTCGTCAAGTTAAT
AAAAATTAATGAGCAACAAAATTTGCAGGTTACATCAATATACTCTGCAA
TATAGCCCCAAGTTTGACATGAAGTATTCTCATTCAACTATATACTTTAA
TGAATGACATAACAATCAAGCTTTGATCACGTAGCACAGTCCTCTATCTC
AAGCTTTGTATCAGTATCAAAGCATATGAACTATCAAGTATACTGATTTT
TTGAATACAACAACCAAGTATGTGATAAGGCATTTCCAAATGAGAGAAAT
ACCATTCCACTTCATCTAGTTCAGTAGAATACAAATTATCAAAAAGCTGA
TTCTAATAATTATAAGAAAGAAAATTAAGGCTTATGTCAATGAAGACTCA
ATCAAGATAGAAAAAGGAAGAATCTTTTCCAATTTACCAGAATAGCAGGT
TTCCCAGTAGCTAAGATCTCAGAGCATGTCATTGCACCTGCTCTAGAGAC
AACAAGGTCAGCAGCAGCATATGCCAAATCCATTGAATGCAGGAACCTGG
AATATAGTTTCACAACTACATCAAATTCAAGGAGAACAAAATTGTGTACT
TACTAATCTTGGAAAAAGAAAAGGGAAGGGTAATAAAGCCATCTCTTCAA
AGCAACAAAGCTACAGTCATTAGTGGGAATTTGCAGTAGCACACAAAAAG
AATAGGTGATATAGATCAACTAAGAAAAATCATATTCCAACCCAATGAGA
TATGTAGGAAACAACTATAGTTGAAAAATTCAATTACAATTACATAATTA
GGGTCACAGACATTCTTATAATTTTCACCAAAACAGCTTAAGGGCCAAAA
TTTGACTATTTTTTTAATTCTCTAGGCTCCTGTCTTGTGAGTTAGATTCA
TAGAACACATATCAAAAGCCAAATATAATTTCATAATATCTGTTACCGTT
GAATTAGCTTGGTAACTAAGTCACACTTTTCTTTCCCATTACAGGAATAA
ACAAGTTCAACTTTTAGCTCTCATCCAAAGAATAAAAATGAAGAGATAAA
CACGCCTTCTCCCATGATAAAAGTGGTCTCCCATTACTTAAGAACAATTT
CAATCTATCTAACCTGTAACTAAAAAAGATTTCTTTGAATTTTCCCTTTC
TTTTCCAGAGGTCATATATACTACATTAATAAGAATCAAAAGCATAAGAT
CTATCCACCTACAGCAGAACATAAGAGAACTAACAGAAGAGAGCTTACGG
TGTCAAAAATAAATGGGGATGGATTCTAACAAGGCTTTCCATTTCATTAT
AAGACTCAACCCCCGTTTGCCATATAATAAACCAATTCTTATGTTCAAGC
AACATTTGACTGTAAAGGTTCAACAAAGCAATATTAACAGTGTTGGCCCC
CAAAGACCCTCCAAGCACCAAAATAACCTTAGCCTCTTCCTTCCCACCAG
ACCTGGGGAAGAATTCCTTCCTAGCCACTGCCTTGGAGACAAATTGCCTC
AATGATAATCTTACAGGATTCCCACTCACCAAACACTTATGCTTTCTGGG
AAAACACTCAACAGTAGAATTATAAGCCACAAAAACAACCTCAGCCAAAA
ACGAAAGAACATAGTTGGCAATGCCCGGAACAGAATTCTGTTCTTGGATC
ACAACCTTGAGTCCTCTAAACAAAGCAGCAAGGCAAGTAGGGAAAGAGAC
ATAGCCCCCAGTGCCAACAACAACATGAGGATTGAAATCTCGAAGAAGCT
TGAAGCTATGTATGGTTGATTGAATCAAATGGAAGGGAAGCGAAAGATTT
CGAAGGGAAAGTAGTGGGCGATACAATCTTACAGGTGGGATGGAAGAGAA
GGGGTATCCAGCAGAAGGGATTGAAGCACTTTCCACGCTATTTGGGGTTC
CAATAAAGAGGAATTGGGTGTTGGGATTTGCGATTCTGAGCTCATCAGCT
ATGGCTACAGCAGGGATTATATGCCCACCAGTCCCACCAGCCGCGAACAC
AACCCGGAGATTGCTGGTGTCTTGCTGGTGGTTGTTGGCGTTGCTGGTGG
CGCTTTGGCTGTCATTTGAATGCTTTATAGATAAGCAGCAGAGGATCTTG
CGAGACCTGAAAAAGCAAACAATAACATTAGAGAGAGGACAGAGATACTG
AATCACTCTGCGTGTTTGTGCAGAAAGAAAGAGAGAGACTTGCCTTGGTT
TGGTGGGGAAGGGGAGAAAAGAAGGGTAGTATGATAAATATGATGAAACT
GGGAAAGGAGAGGGGAGGAGGTGGCGGTGGCGGTGGGTGGTGGCCAT
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mRNA from alignment at Chromosome01:2502672..2506918-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Manes.01G015400.1.v6.1 ID=Manes.01G015400.1.v6.1|Name=Manes.01G015400.1|organism=Manihot esculenta|type=mRNA|length=4247bp|location=Sequence derived from alignment at Chromosome01:2502672..2506918- (Manihot esculenta)
ATGGCCACCACCCACCGCCACCGCCACCTCCTCCCCTCTCCTTTCCCAGT TTCATCATATTTATCATACTACCCTTCTTTTCTCCCCTTCCCCACCAAAC CAAGGCAAGTCTCTCTCTTTCTTTCTGCACAAACACGCAGAGTGATTCAG TATCTCTGTCCTCTCTCTAATGTTATTGTTTGCTTTTTCAGGTCTCGCAA GATCCTCTGCTGCTTATCTATAAAGCATTCAAATGACAGCCAAAGCGCCA CCAGCAACGCCAACAACCACCAGCAAGACACCAGCAATCTCCGGGTTGTG TTCGCGGCTGGTGGGACTGGTGGGCATATAATCCCTGCTGTAGCCATAGC TGATGAGCTCAGAATCGCAAATCCCAACACCCAATTCCTCTTTATTGGAA CCCCAAATAGCGTGGAAAGTGCTTCAATCCCTTCTGCTGGATACCCCTTC TCTTCCATCCCACCTGTAAGATTGTATCGCCCACTACTTTCCCTTCGAAA TCTTTCGCTTCCCTTCCATTTGATTCAATCAACCATACATAGCTTCAAGC TTCTTCGAGATTTCAATCCTCATGTTGTTGTTGGCACTGGGGGCTATGTC TCTTTCCCTACTTGCCTTGCTGCTTTGTTTAGAGGACTCAAGGTTGTGAT CCAAGAACAGAATTCTGTTCCGGGCATTGCCAACTATGTTCTTTCGTTTT TGGCTGAGGTTGTTTTTGTGGCTTATAATTCTACTGTTGAGTGTTTTCCC AGAAAGCATAAGTGTTTGGTGAGTGGGAATCCTGTAAGATTATCATTGAG GCAATTTGTCTCCAAGGCAGTGGCTAGGAAGGAATTCTTCCCCAGGTCTG GTGGGAAGGAAGAGGCTAAGGTTATTTTGGTGCTTGGAGGGTCTTTGGGG GCCAACACTGTTAATATTGCTTTGTTGAACCTTTACAGTCAAATGTTGCT TGAACATAAGAATTGGTTTATTATATGGCAAACGGGGGTTGAGTCTTATA ATGAAATGGAAAGCCTTGTTAGAATCCATCCCCATTTATTTTTGACACCG TAAGCTCTCTTCTGTTAGTTCTCTTATGTTCTGCTGTAGGTGGATAGATC TTATGCTTTTGATTCTTATTAATGTAGTATATATGACCTCTGGAAAAGAA AGGGAAAATTCAAAGAAATCTTTTTTAGTTACAGGTTAGATAGATTGAAA TTGTTCTTAAGTAATGGGAGACCACTTTTATCATGGGAGAAGGCGTGTTT ATCTCTTCATTTTTATTCTTTGGATGAGAGCTAAAAGTTGAACTTGTTTA TTCCTGTAATGGGAAAGAAAAGTGTGACTTAGTTACCAAGCTAATTCAAC GGTAACAGATATTATGAAATTATATTTGGCTTTTGATATGTGTTCTATGA ATCTAACTCACAAGACAGGAGCCTAGAGAATTAAAAAAATAGTCAAATTT TGGCCCTTAAGCTGTTTTGGTGAAAATTATAAGAATGTCTGTGACCCTAA TTATGTAATTGTAATTGAATTTTTCAACTATAGTTGTTTCCTACATATCT CATTGGGTTGGAATATGATTTTTCTTAGTTGATCTATATCACCTATTCTT TTTGTGTGCTACTGCAAATTCCCACTAATGACTGTAGCTTTGTTGCTTTG AAGAGATGGCTTTATTACCCTTCCCTTTTCTTTTTCCAAGATTAGTAAGT ACACAATTTTGTTCTCCTTGAATTTGATGTAGTTGTGAAACTATATTCCA GGTTCCTGCATTCAATGGATTTGGCATATGCTGCTGCTGACCTTGTTGTC TCTAGAGCAGGTGCAATGACATGCTCTGAGATCTTAGCTACTGGGAAACC TGCTATTCTGGTAAATTGGAAAAGATTCTTCCTTTTTCTATCTTGATTGA GTCTTCATTGACATAAGCCTTAATTTTCTTTCTTATAATTATTAGAATCA GCTTTTTGATAATTTGTATTCTACTGAACTAGATGAAGTGGAATGGTATT TCTCTCATTTGGAAATGCCTTATCACATACTTGGTTGTTGTATTCAAAAA ATCAGTATACTTGATAGTTCATATGCTTTGATACTGATACAAAGCTTGAG ATAGAGGACTGTGCTACGTGATCAAAGCTTGATTGTTATGTCATTCATTA AAGTATATAGTTGAATGAGAATACTTCATGTCAAACTTGGGGCTATATTG CAGAGTATATTGATGTAACCTGCAAATTTTGTTGCTCATTAATTTTTATT AACTTGACGACTAATTCCACACTGCTAGTGGAAGCAATTCAAGGATTTTC TTCATGGACATTAATTTGACCATTTCAAAAAAGTAGAAACTGAAGAAAGA TGTGAATTAGGGGTTAATCATCTTCTGTTGACGTTTGTAACATACATCTT TTATTACAGCCCTGGTACTCAAAGTTTATTGATAGATAAATTTCTATATT TTATTTTTTAAGCATCCCAAAAGCAGAGAAATCATTAATCCATGTGTATA TATATGTAAATTATAAGTTTACTGCTAATAAAGGGTTTGATGATATTGGA AACCCCCCTAAAGCAAAATTTGCATCGCGTAAGTTAAGGAGTTCCATGTT GCATAATCACAAAGGCAAATAAATATTTCACAGCAATCATAAAAGAGTGG ATGAAAGAACAATATGGTTAGTTATGCGATTGCGTATGTTAATCTGTACT AATTTGTCTCTGAAGATATTATAACCATGTATTTTTTATGCGTAAGACTC TAACAAGTTTCATCCTAAAATTGTAGACTGTGGGATTTTGTTGTTAAGAG TATCAAGCCAGTGCCACCACCAGCATAAGTTTGAACAATTGAGCTCTTTT GTATCAGAATATGAAACTAGGAGCCCAATTGACATTGGTTTTCATGATGG ATGTTGAGATGTTCTTAAATGCATTAAGGCTTCGTATTTCTTTTTGTGTG CACTCTGATGCTTGACTTCATATAAATTCAAATCCATATCACTTCTTTAT GATCAAGCTATCCATTCAGCTTTTACTTTGCCCAAATTGTCAACTGTTAG GTTGGTTATATTGCTTGAAGACATAATATCACTCTACTTTGCAGATACCA TCACCAAATCTAGAGGAAGGACATCAACTAAGAAATGCTTCGCTAATGGC AGATGTAGCAGGTACGAGGGTTATAACTGAAGATGAGCTAGATTCAACTA CCTTGGGAGCCACAATTGAAGAGATTATAGGTAAGTTAAACATGTTGCTT ATTTATTCTGCCCGATAGGGGAAGAAATGAAAGAAAAAGTGGCTATTTAA ATAATTTTTGCTTCAAATGGTTTCTTTGCCCATGAAATATGAGAACTCAA CCTCATACATGCATGGCTCTTTGGAAATTTTTTCAGCTGCATGAAAAATA TAATTTTTTAAGGAGCAAGAAAAGGGAACATATGTATTAACAAGATGGTA ACTGGGATATTTTAGCCAATGTTAGGTGATGAAATTTGCTTTTACTTTGC GTATAGGCAAGTGGAAAGTATAGCAGTAATTTTATTTGAATCAACCTTTT TTTTTCTAAATCTTTCTCCTTTTATTTCCCTCAACCAGAAGTTATGTACA TTTTTGCCTTTCATCTCAACAAAACATCAATATTTGGGAATGCCCATATC CATCGAATACAAATGAAACAAAATCAGTAAATTGTGAAGTAACTTGAATA GGCTACAACTGGAAAAGCTTGCCAAGTTCATTTTAGACCATGAGCCCAAC AAAATTAGTAATTTGTATGCAAGACATGTAATGTGCTAAGCTTTTTCTGC AAAATTATGAGAATTTGATGAATCCTAAAGGTATATCTAGATGTTATGAA GGATAAGGTAGTGGCCTATCCTTATCTAACAACTTCCTTACCAACTGTTA CCAACTGAAAAGGTACTGGAATCAGTTAAATTCCTTGGGTCAGTGCAGAT GTTTCGGGAAATTTATGTAATAGGATCTTCACATTGTCAATTTCTTTTTG TAGTTTTTATTTTTATTTTTTAAATAATATTTTGCATACAATTATAATGC TAGATGTATTATAGTAAATTTACACTTTGAATAATTTCATTTTGTAACTG AAAAATAATTATATGGTTGCTGTAGCAGGAGACAAGGATGTAATGGCAGA TATGTCAGAAAGGGCTCTAAAAGCTGCAAAGCCAGATGCCTCTGCAGAAA TCGCATTGCATATTCTCTCCCTGGTTGAGGCATCTACTAAGAAGTAG
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Coding sequence (CDS) from alignment at Chromosome01:2502672..2506918-

>Manes.01G015400.1.v6.1 ID=Manes.01G015400.1.v6.1|Name=Manes.01G015400.1|organism=Manihot esculenta|type=CDS|length=1326bp|location=Sequence derived from alignment at Chromosome01:2502672..2506918- (Manihot esculenta)
ATGGCCACCACCCACCGCCACCGCCACCTCCTCCCCTCTCCTTTCCCAGT
TTCATCATATTTATCATACTACCCTTCTTTTCTCCCCTTCCCCACCAAAC
CAAGGTCTCGCAAGATCCTCTGCTGCTTATCTATAAAGCATTCAAATGAC
AGCCAAAGCGCCACCAGCAACGCCAACAACCACCAGCAAGACACCAGCAA
TCTCCGGGTTGTGTTCGCGGCTGGTGGGACTGGTGGGCATATAATCCCTG
CTGTAGCCATAGCTGATGAGCTCAGAATCGCAAATCCCAACACCCAATTC
CTCTTTATTGGAACCCCAAATAGCGTGGAAAGTGCTTCAATCCCTTCTGC
TGGATACCCCTTCTCTTCCATCCCACCTGTAAGATTGTATCGCCCACTAC
TTTCCCTTCGAAATCTTTCGCTTCCCTTCCATTTGATTCAATCAACCATA
CATAGCTTCAAGCTTCTTCGAGATTTCAATCCTCATGTTGTTGTTGGCAC
TGGGGGCTATGTCTCTTTCCCTACTTGCCTTGCTGCTTTGTTTAGAGGAC
TCAAGGTTGTGATCCAAGAACAGAATTCTGTTCCGGGCATTGCCAACTAT
GTTCTTTCGTTTTTGGCTGAGGTTGTTTTTGTGGCTTATAATTCTACTGT
TGAGTGTTTTCCCAGAAAGCATAAGTGTTTGGTGAGTGGGAATCCTGTAA
GATTATCATTGAGGCAATTTGTCTCCAAGGCAGTGGCTAGGAAGGAATTC
TTCCCCAGGTCTGGTGGGAAGGAAGAGGCTAAGGTTATTTTGGTGCTTGG
AGGGTCTTTGGGGGCCAACACTGTTAATATTGCTTTGTTGAACCTTTACA
GTCAAATGTTGCTTGAACATAAGAATTGGTTTATTATATGGCAAACGGGG
GTTGAGTCTTATAATGAAATGGAAAGCCTTGTTAGAATCCATCCCCATTT
ATTTTTGACACCGTTCCTGCATTCAATGGATTTGGCATATGCTGCTGCTG
ACCTTGTTGTCTCTAGAGCAGGTGCAATGACATGCTCTGAGATCTTAGCT
ACTGGGAAACCTGCTATTCTGATACCATCACCAAATCTAGAGGAAGGACA
TCAACTAAGAAATGCTTCGCTAATGGCAGATGTAGCAGGTACGAGGGTTA
TAACTGAAGATGAGCTAGATTCAACTACCTTGGGAGCCACAATTGAAGAG
ATTATAGGAGACAAGGATGTAATGGCAGATATGTCAGAAAGGGCTCTAAA
AGCTGCAAAGCCAGATGCCTCTGCAGAAATCGCATTGCATATTCTCTCCC
TGGTTGAGGCATCTACTAAGAAGTAG
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