Manes.01G014600.1.v6.1 (mRNA)

Overview
NameManes.01G014600.1
Unique NameManes.01G014600.1.v6.1
TypemRNA
OrganismManihot esculenta (Cassava)
Sequence length1748
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chromosome01chromosomeChromosome01:2446543..2448290 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Manihot esculenta (JGI)2015-07-22
Properties
Property NameValue
Pacid32357344
Longest1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Manes.01G014600Manes.01G014600.v6.1Manihot esculentagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Manes.01G014600.1Manes.01G014600.1.v6.1-proteinManihot esculentapolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Manes.01G014600.1.v6.1.CDS.1Manes.01G014600.1.v6.1.CDS.1Manihot esculentaCDS
Manes.01G014600.1.v6.1.CDS.2Manes.01G014600.1.v6.1.CDS.2Manihot esculentaCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Manes.01G014600.1.v6.1 ID=Manes.01G014600.1.v6.1|Name=Manes.01G014600.1|organism=Manihot esculenta|type=mRNA|length=1748bp
ATGAAGATTGTGAGATGGGACTTGTGGCAAGGTGCTTGTCTTGCTGAAGC
TGAAAACCTCCAAGACGTTGCTTTGAACCATCCTCTCTATGGATACACTT
CAACGTCTAGAAACCTTACATTAATCTATGGATGTCCCATGGTGGATTCA
ATGTTGAGTTATGCCTTTACATGTGATCTGCAGGCTACACATGTTTACAA
TTACTATGCAGATGAAATCACCTGGGAACTTCAACAACCACAACTTGTAA
AGTATTGCAGAGCTCACCTAACAAGTCCAGTTTCACAGGCTGCTCTAATG
GAACTCTATGGTGGATCCAAGACAGTAAATGAAGCTCTGAGTGAAGGTTT
CGACGTCGAATATCAAGCTCACAGACATTCATGTGTATCTTGTCAGGATT
CTGGTGGGATCTGCGGATCTAACTTAACTACACATGATTTTGTCTGCCTT
CGCAGAGACCAGCCAAGGAAGAATGCATCTTCCCCTGGAACAATCTCTGG
TATAGTATTCTTCTAACTGTACTCTTCTCGTTTCAACTTTTCCAGTCCTT
GAGCTTATCTGCAACAACTTATTGTGTTACAGGCCATGAATCAAATCTGA
AGAAATATTTAATGGGGATTATTATTGGCTTTACATTGGCTGGGATGTCA
TTACTTTGCTTTTTGCTCTATTGTTTTTGGAGCTTTAAAAGGGTGACAGC
TTCAAACCAAATGGCAATCCCCTTTAGAAGACTTGAGTATAATCAGAAGA
TTGAGAAAGTTATTAGACAAACCATTGCTCCAAAAAGATATAGCTATTCA
GATGTAAAGAAAATGACAGCCTCATTTAAGGATAAATTAGGTCAAGGAGG
TTATGGCATTGTTTACAAGGGAAAGCTATTAGATGGTCGTCCTGTGGCAG
TGAAGATTCTGATGAAAAATATTCCAAAAGGGAAAAGAAATGGAGAAGAA
TTTATCAATGAGGTTGCTATTATTAGTAGAACATCACATGTTAATGTAGT
TTCTCTTCTGGGATTCTGCTTTGAAGGTCACAAACGAGCTCTCATATACG
AGTTCATGGCTAATGGTTCACTTGAGAAGTTCATGTACAATGGAAATACT
TGGAAAGCCGGTTGCTGCCTGGAATGGGAAATTTTGTATGAAATTGCAAT
AGGAATAGCTAAAGGGCTTGAGTATCTACATGGTGGATGTAATACTCGAA
TCTTGCATTTAGATATCAAACCTCAAAACATACTTTTGGATGAACATTTT
CTTCCTAAAATTGCCGATTTCGGGCTTTCAAAACTGTGTTCCAGGAAAGA
AAGCACTGCATCAATGGAAAATGTAAGGGGGACAATTGGGTATATTGCTC
CAGAAGTATACAGCAGATGCTTTGGAAGAGTTTCACACAAGTCGGATGTA
TATAGCTATGGGATGATGATATTAGAAATGGTTAGTGGAAGGAAGAATGC
AAATGTTAAAGCAAATGATGCAAGTAAAATATATTTTCCACATTGGATCT
ATCACCGTCTTCAGCAGGACAGTGACTTAGGACTATGTTCTGTCAGAACC
AAAGAGGAAGATGAAATTGCAAGAAGATTAGTGTTGGTGGGGTTATGGTG
CATACAGACAAACCTTTCACATAGACCATCCATGAGTGAGGTTTTGGTCA
TGTTGGAAGTTTGTAGTGAAGCATTGGAAATTCCTCCAAGGCCTTTCAAT
GTTTCTCCTCAAAGTTCATCTGGTAACCTTTCTCCCACTTCAGTTTAA
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mRNA from alignment at Chromosome01:2446543..2448290+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Manes.01G014600.1.v6.1 ID=Manes.01G014600.1.v6.1|Name=Manes.01G014600.1|organism=Manihot esculenta|type=mRNA|length=1748bp|location=Sequence derived from alignment at Chromosome01:2446543..2448290+ (Manihot esculenta)
ATGAAGATTGTGAGATGGGACTTGTGGCAAGGTGCTTGTCTTGCTGAAGC TGAAAACCTCCAAGACGTTGCTTTGAACCATCCTCTCTATGGATACACTT CAACGTCTAGAAACCTTACATTAATCTATGGATGTCCCATGGTGGATTCA ATGTTGAGTTATGCCTTTACATGTGATCTGCAGGCTACACATGTTTACAA TTACTATGCAGATGAAATCACCTGGGAACTTCAACAACCACAACTTGTAA AGTATTGCAGAGCTCACCTAACAAGTCCAGTTTCACAGGCTGCTCTAATG GAACTCTATGGTGGATCCAAGACAGTAAATGAAGCTCTGAGTGAAGGTTT CGACGTCGAATATCAAGCTCACAGACATTCATGTGTATCTTGTCAGGATT CTGGTGGGATCTGCGGATCTAACTTAACTACACATGATTTTGTCTGCCTT CGCAGAGACCAGCCAAGGAAGAATGCATCTTCCCCTGGAACAATCTCTGG TATAGTATTCTTCTAACTGTACTCTTCTCGTTTCAACTTTTCCAGTCCTT GAGCTTATCTGCAACAACTTATTGTGTTACAGGCCATGAATCAAATCTGA AGAAATATTTAATGGGGATTATTATTGGCTTTACATTGGCTGGGATGTCA TTACTTTGCTTTTTGCTCTATTGTTTTTGGAGCTTTAAAAGGGTGACAGC TTCAAACCAAATGGCAATCCCCTTTAGAAGACTTGAGTATAATCAGAAGA TTGAGAAAGTTATTAGACAAACCATTGCTCCAAAAAGATATAGCTATTCA GATGTAAAGAAAATGACAGCCTCATTTAAGGATAAATTAGGTCAAGGAGG TTATGGCATTGTTTACAAGGGAAAGCTATTAGATGGTCGTCCTGTGGCAG TGAAGATTCTGATGAAAAATATTCCAAAAGGGAAAAGAAATGGAGAAGAA TTTATCAATGAGGTTGCTATTATTAGTAGAACATCACATGTTAATGTAGT TTCTCTTCTGGGATTCTGCTTTGAAGGTCACAAACGAGCTCTCATATACG AGTTCATGGCTAATGGTTCACTTGAGAAGTTCATGTACAATGGAAATACT TGGAAAGCCGGTTGCTGCCTGGAATGGGAAATTTTGTATGAAATTGCAAT AGGAATAGCTAAAGGGCTTGAGTATCTACATGGTGGATGTAATACTCGAA TCTTGCATTTAGATATCAAACCTCAAAACATACTTTTGGATGAACATTTT CTTCCTAAAATTGCCGATTTCGGGCTTTCAAAACTGTGTTCCAGGAAAGA AAGCACTGCATCAATGGAAAATGTAAGGGGGACAATTGGGTATATTGCTC CAGAAGTATACAGCAGATGCTTTGGAAGAGTTTCACACAAGTCGGATGTA TATAGCTATGGGATGATGATATTAGAAATGGTTAGTGGAAGGAAGAATGC AAATGTTAAAGCAAATGATGCAAGTAAAATATATTTTCCACATTGGATCT ATCACCGTCTTCAGCAGGACAGTGACTTAGGACTATGTTCTGTCAGAACC AAAGAGGAAGATGAAATTGCAAGAAGATTAGTGTTGGTGGGGTTATGGTG CATACAGACAAACCTTTCACATAGACCATCCATGAGTGAGGTTTTGGTCA TGTTGGAAGTTTGTAGTGAAGCATTGGAAATTCCTCCAAGGCCTTTCAAT GTTTCTCCTCAAAGTTCATCTGGTAACCTTTCTCCCACTTCAGTTTAA
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Coding sequence (CDS) from alignment at Chromosome01:2446543..2448290+

>Manes.01G014600.1.v6.1 ID=Manes.01G014600.1.v6.1|Name=Manes.01G014600.1|organism=Manihot esculenta|type=CDS|length=1665bp|location=Sequence derived from alignment at Chromosome01:2446543..2448290+ (Manihot esculenta)
ATGAAGATTGTGAGATGGGACTTGTGGCAAGGTGCTTGTCTTGCTGAAGC
TGAAAACCTCCAAGACGTTGCTTTGAACCATCCTCTCTATGGATACACTT
CAACGTCTAGAAACCTTACATTAATCTATGGATGTCCCATGGTGGATTCA
ATGTTGAGTTATGCCTTTACATGTGATCTGCAGGCTACACATGTTTACAA
TTACTATGCAGATGAAATCACCTGGGAACTTCAACAACCACAACTTGTAA
AGTATTGCAGAGCTCACCTAACAAGTCCAGTTTCACAGGCTGCTCTAATG
GAACTCTATGGTGGATCCAAGACAGTAAATGAAGCTCTGAGTGAAGGTTT
CGACGTCGAATATCAAGCTCACAGACATTCATGTGTATCTTGTCAGGATT
CTGGTGGGATCTGCGGATCTAACTTAACTACACATGATTTTGTCTGCCTT
CGCAGAGACCAGCCAAGGAAGAATGCATCTTCCCCTGGAACAATCTCTGG
CCATGAATCAAATCTGAAGAAATATTTAATGGGGATTATTATTGGCTTTA
CATTGGCTGGGATGTCATTACTTTGCTTTTTGCTCTATTGTTTTTGGAGC
TTTAAAAGGGTGACAGCTTCAAACCAAATGGCAATCCCCTTTAGAAGACT
TGAGTATAATCAGAAGATTGAGAAAGTTATTAGACAAACCATTGCTCCAA
AAAGATATAGCTATTCAGATGTAAAGAAAATGACAGCCTCATTTAAGGAT
AAATTAGGTCAAGGAGGTTATGGCATTGTTTACAAGGGAAAGCTATTAGA
TGGTCGTCCTGTGGCAGTGAAGATTCTGATGAAAAATATTCCAAAAGGGA
AAAGAAATGGAGAAGAATTTATCAATGAGGTTGCTATTATTAGTAGAACA
TCACATGTTAATGTAGTTTCTCTTCTGGGATTCTGCTTTGAAGGTCACAA
ACGAGCTCTCATATACGAGTTCATGGCTAATGGTTCACTTGAGAAGTTCA
TGTACAATGGAAATACTTGGAAAGCCGGTTGCTGCCTGGAATGGGAAATT
TTGTATGAAATTGCAATAGGAATAGCTAAAGGGCTTGAGTATCTACATGG
TGGATGTAATACTCGAATCTTGCATTTAGATATCAAACCTCAAAACATAC
TTTTGGATGAACATTTTCTTCCTAAAATTGCCGATTTCGGGCTTTCAAAA
CTGTGTTCCAGGAAAGAAAGCACTGCATCAATGGAAAATGTAAGGGGGAC
AATTGGGTATATTGCTCCAGAAGTATACAGCAGATGCTTTGGAAGAGTTT
CACACAAGTCGGATGTATATAGCTATGGGATGATGATATTAGAAATGGTT
AGTGGAAGGAAGAATGCAAATGTTAAAGCAAATGATGCAAGTAAAATATA
TTTTCCACATTGGATCTATCACCGTCTTCAGCAGGACAGTGACTTAGGAC
TATGTTCTGTCAGAACCAAAGAGGAAGATGAAATTGCAAGAAGATTAGTG
TTGGTGGGGTTATGGTGCATACAGACAAACCTTTCACATAGACCATCCAT
GAGTGAGGTTTTGGTCATGTTGGAAGTTTGTAGTGAAGCATTGGAAATTC
CTCCAAGGCCTTTCAATGTTTCTCCTCAAAGTTCATCTGGTAACCTTTCT
CCCACTTCAGTTTAA
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