Manes.01G014000.1.v6.1 (mRNA)

Overview
NameManes.01G014000.1
Unique NameManes.01G014000.1.v6.1
TypemRNA
OrganismManihot esculenta (Cassava)
Sequence length947
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chromosome01chromosomeChromosome01:2388611..2389557 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Manihot esculenta (JGI)2015-07-22
Properties
Property NameValue
Pacid32359022
Longest1
AncestorIdentifiercassava4.1_029255m.v4.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Manes.01G014000Manes.01G014000.v6.1Manihot esculentagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Manes.01G014000.1Manes.01G014000.1.v6.1-proteinManihot esculentapolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Manes.01G014000.1.v6.1.CDS.2Manes.01G014000.1.v6.1.CDS.2Manihot esculentaCDS
Manes.01G014000.1.v6.1.CDS.1Manes.01G014000.1.v6.1.CDS.1Manihot esculentaCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Manes.01G014000.1.v6.1 ID=Manes.01G014000.1.v6.1|Name=Manes.01G014000.1|organism=Manihot esculenta|type=mRNA|length=947bp
TCATGACTCAGGAACTTCAGGAACCTTGTATGAATCTGGTGTAACTTCTG
CTAGCCACAATCCTGGAAAAATTGACTGCAAATAAACAAAAAACAAATAT
AAACATATATAAATCAAAAGCTAGGAAGAGGAAAACAAAATTGAAATACG
AATGGAGACTACAAATTTCCTTTAAGTTGCTAAGAGAACAAGAAAAAGCA
AAGAAAATTTTGAATACTTCCGCCGTTTAATTCTTCCTCTCAGCCAGGAA
AACTGAATTGGATTAATCAGTTCACAATAGCAAAACTTCCAACTATCAAA
TTCCAGAAGTCGTCTACTTTTCCCACGTTTTCCTAGAAAATATACCAAAA
ACATAAAAATTAAAGCACAAAAATGCTTACGTCCAAATACTTCTGCACCA
TTCGAGGTCTCTTCTTGGGCCTTCTGGGTGGCCTAATCCTAGCAATCTCC
ATGAAATCTTGCTCAATCTCCTCCTTTGAAAGAGGAACCGAAAACTTGAT
TCTCTCCTTCTGGGGTTCCATACTCTGCCTCTTAACCAGCGAATCAATCT
CCAAAGCTTTTCTCGGTGGATCAATATTCAACTTATCTTCAATCCGCAGT
GGCGCCTTGCATGCCGCTCTTCTGGTCCTCAAATTCCAAGGCCTCGTAGA
ATCATCATTACCTCTCTCTTCTTCAATAAGAGGAGAGACCTTCAATCTCT
TGGCACCTCCATTGAATCTAAGATCAGGAGAAATGGGATTTTCTTGGATT
ATGATTGGTTTGTGATTGCTGGGGGTCTCAAGGCTGGTGGGTTGGGATTG
AAATCCATTAGGAATAGAAGAAGAAGATCGATGATGAGGATCATCAGTGA
GTTTGACACATCTAAGAACTCTTTGGTGACCCCATTTCAAGCAAGGCAAT
GAGAAGTTGTGTAGTGGCTTTGATCGATCTTGCGGTGGCATTGCCAT
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mRNA from alignment at Chromosome01:2388611..2389557-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Manes.01G014000.1.v6.1 ID=Manes.01G014000.1.v6.1|Name=Manes.01G014000.1|organism=Manihot esculenta|type=mRNA|length=947bp|location=Sequence derived from alignment at Chromosome01:2388611..2389557- (Manihot esculenta)
ATGGCAATGCCACCGCAAGATCGATCAAAGCCACTACACAACTTCTCATT GCCTTGCTTGAAATGGGGTCACCAAAGAGTTCTTAGATGTGTCAAACTCA CTGATGATCCTCATCATCGATCTTCTTCTTCTATTCCTAATGGATTTCAA TCCCAACCCACCAGCCTTGAGACCCCCAGCAATCACAAACCAATCATAAT CCAAGAAAATCCCATTTCTCCTGATCTTAGATTCAATGGAGGTGCCAAGA GATTGAAGGTCTCTCCTCTTATTGAAGAAGAGAGAGGTAATGATGATTCT ACGAGGCCTTGGAATTTGAGGACCAGAAGAGCGGCATGCAAGGCGCCACT GCGGATTGAAGATAAGTTGAATATTGATCCACCGAGAAAAGCTTTGGAGA TTGATTCGCTGGTTAAGAGGCAGAGTATGGAACCCCAGAAGGAGAGAATC AAGTTTTCGGTTCCTCTTTCAAAGGAGGAGATTGAGCAAGATTTCATGGA GATTGCTAGGATTAGGCCACCCAGAAGGCCCAAGAAGAGACCTCGAATGG TGCAGAAGTATTTGGACGTAAGCATTTTTGTGCTTTAATTTTTATGTTTT TGGTATATTTTCTAGGAAAACGTGGGAAAAGTAGACGACTTCTGGAATTT GATAGTTGGAAGTTTTGCTATTGTGAACTGATTAATCCAATTCAGTTTTC CTGGCTGAGAGGAAGAATTAAACGGCGGAAGTATTCAAAATTTTCTTTGC TTTTTCTTGTTCTCTTAGCAACTTAAAGGAAATTTGTAGTCTCCATTCGT ATTTCAATTTTGTTTTCCTCTTCCTAGCTTTTGATTTATATATGTTTATA TTTGTTTTTTGTTTATTTGCAGTCAATTTTTCCAGGATTGTGGCTAGCAG AAGTTACACCAGATTCATACAAGGTTCCTGAAGTTCCTGAGTCATGA
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Coding sequence (CDS) from alignment at Chromosome01:2388611..2389557-

>Manes.01G014000.1.v6.1 ID=Manes.01G014000.1.v6.1|Name=Manes.01G014000.1|organism=Manihot esculenta|type=CDS|length=642bp|location=Sequence derived from alignment at Chromosome01:2388611..2389557- (Manihot esculenta)
ATGGCAATGCCACCGCAAGATCGATCAAAGCCACTACACAACTTCTCATT
GCCTTGCTTGAAATGGGGTCACCAAAGAGTTCTTAGATGTGTCAAACTCA
CTGATGATCCTCATCATCGATCTTCTTCTTCTATTCCTAATGGATTTCAA
TCCCAACCCACCAGCCTTGAGACCCCCAGCAATCACAAACCAATCATAAT
CCAAGAAAATCCCATTTCTCCTGATCTTAGATTCAATGGAGGTGCCAAGA
GATTGAAGGTCTCTCCTCTTATTGAAGAAGAGAGAGGTAATGATGATTCT
ACGAGGCCTTGGAATTTGAGGACCAGAAGAGCGGCATGCAAGGCGCCACT
GCGGATTGAAGATAAGTTGAATATTGATCCACCGAGAAAAGCTTTGGAGA
TTGATTCGCTGGTTAAGAGGCAGAGTATGGAACCCCAGAAGGAGAGAATC
AAGTTTTCGGTTCCTCTTTCAAAGGAGGAGATTGAGCAAGATTTCATGGA
GATTGCTAGGATTAGGCCACCCAGAAGGCCCAAGAAGAGACCTCGAATGG
TGCAGAAGTATTTGGACTCAATTTTTCCAGGATTGTGGCTAGCAGAAGTT
ACACCAGATTCATACAAGGTTCCTGAAGTTCCTGAGTCATGA
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