Manes.01G013900.1.v6.1 (mRNA)

Overview
NameManes.01G013900.1
Unique NameManes.01G013900.1.v6.1
TypemRNA
OrganismManihot esculenta (Cassava)
Sequence length464
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chromosome01chromosomeChromosome01:2386530..2386993 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Manihot esculenta (JGI)2015-07-22
Properties
Property NameValue
Pacid32357370
Longest1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Manes.01G013900Manes.01G013900.v6.1Manihot esculentagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Manes.01G013900.1Manes.01G013900.1.v6.1-proteinManihot esculentapolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Manes.01G013900.1.v6.1.CDS.2Manes.01G013900.1.v6.1.CDS.2Manihot esculentaCDS
Manes.01G013900.1.v6.1.CDS.1Manes.01G013900.1.v6.1.CDS.1Manihot esculentaCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Manes.01G013900.1.v6.1 ID=Manes.01G013900.1.v6.1|Name=Manes.01G013900.1|organism=Manihot esculenta|type=mRNA|length=464bp
TCAACCCAGAAAAATTTCTTGAAAGAACTCTGGATTAGTGGAGTCAACCA
ACAGCTGGGATTGCATGGGATGATCTCTCAACAGAAGGAACCCAGGTTTA
AAAATAAGAGAATTGTCCTCAACAAATGAACACAATGTTATGAAGTAGCT
GCAAGATTTGACCCAGGTTTTAAAAATAGGAGAATTTTCCTTCAACAAAT
CAACAAACCAGCTGCAAGATTTGAAGAGAAAAAGATTAACAGTGAGCATA
AATCTTATGAAGCAGCTAATCAGAATGTGCTATTCACTCTGATACCTAAA
ATGAGAACTTACTTAGATGCGTTGATGCTAAATATACGTTTCAGCTGGAT
TTTAGAGATTAATAATTCTATAGACAACCTAAACTTAAGTACAACAGGAT
CCTTGTAAGGCAATTCCGACAGATGTGGCTCCATGAGACTACCAACCTTT
GGCTTCGGCTTCAT
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mRNA from alignment at Chromosome01:2386530..2386993-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Manes.01G013900.1.v6.1 ID=Manes.01G013900.1.v6.1|Name=Manes.01G013900.1|organism=Manihot esculenta|type=mRNA|length=464bp|location=Sequence derived from alignment at Chromosome01:2386530..2386993- (Manihot esculenta)
ATGAAGCCGAAGCCAAAGGTTGGTAGTCTCATGGAGCCACATCTGTCGGA ATTGCCTTACAAGGATCCTGTTGTACTTAAGTTTAGGTTGTCTATAGAAT TATTAATCTCTAAAATCCAGCTGAAACGTATATTTAGCATCAACGCATCT AAGTAAGTTCTCATTTTAGGTATCAGAGTGAATAGCACATTCTGATTAGC TGCTTCATAAGATTTATGCTCACTGTTAATCTTTTTCTCTTCAAATCTTG CAGCTGGTTTGTTGATTTGTTGAAGGAAAATTCTCCTATTTTTAAAACCT GGGTCAAATCTTGCAGCTACTTCATAACATTGTGTTCATTTGTTGAGGAC AATTCTCTTATTTTTAAACCTGGGTTCCTTCTGTTGAGAGATCATCCCAT GCAATCCCAGCTGTTGGTTGACTCCACTAATCCAGAGTTCTTTCAAGAAA TTTTTCTGGGTTGA
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Coding sequence (CDS) from alignment at Chromosome01:2386530..2386993-

>Manes.01G013900.1.v6.1 ID=Manes.01G013900.1.v6.1|Name=Manes.01G013900.1|organism=Manihot esculenta|type=CDS|length=363bp|location=Sequence derived from alignment at Chromosome01:2386530..2386993- (Manihot esculenta)
ATGAAGCCGAAGCCAAAGGTTGGTAGTCTCATGGAGCCACATCTGTCGGA
ATTGCCTTACAAGGATCCTGTTGTACTTAAGTTTAGGTTGTCTATAGAAT
TATTAATCTCTAAAATCCAGCTGAAACGTATATTTAGCATCAACGCATCT
AACTGGTTTGTTGATTTGTTGAAGGAAAATTCTCCTATTTTTAAAACCTG
GGTCAAATCTTGCAGCTACTTCATAACATTGTGTTCATTTGTTGAGGACA
ATTCTCTTATTTTTAAACCTGGGTTCCTTCTGTTGAGAGATCATCCCATG
CAATCCCAGCTGTTGGTTGACTCCACTAATCCAGAGTTCTTTCAAGAAAT
TTTTCTGGGTTGA
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