Manes.01G010900.1.v6.1 (mRNA)

Overview
NameManes.01G010900.1
Unique NameManes.01G010900.1.v6.1
TypemRNA
OrganismManihot esculenta (Cassava)
Sequence length684
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chromosome01chromosomeChromosome01:1957364..1958047 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Manihot esculenta (JGI)2015-07-22
Properties
Property NameValue
Pacid32358011
Longest1
AncestorIdentifiercassava4.1_033197m.v4.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Manes.01G010900Manes.01G010900.v6.1Manihot esculentagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Manes.01G010900.1Manes.01G010900.1.v6.1-proteinManihot esculentapolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Manes.01G010900.1.v6.1.CDS.1Manes.01G010900.1.v6.1.CDS.1Manihot esculentaCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Manes.01G010900.1.v6.1 ID=Manes.01G010900.1.v6.1|Name=Manes.01G010900.1|organism=Manihot esculenta|type=mRNA|length=684bp
CTAATATTCGTGAAATTCATTTATCCCCTCCATTGTAGAAGAAGAAGATG
AAATGGACGTCCTCATATTAGGAGTGGTGAAGAACAAAGAATCTGTATAA
TTATAAAATGGCTGATTTGCACATAAAAAATCAGCTGAATTTGGTGTAAA
AATCGGAATATTAGTCATATAAGGATTTGAAGGCTCAAAAATCGGAGGAA
CAAAACAAGAATTAACTTGTCCATCACCTATGCTTCCACAATTTTCTTCT
GTAATCACTGACGAAGATTCATTATCATCGTTTCCATTTCCAGCCCTCTT
CCCATTGCTATTATTCTCTTCCTCCGGCGAAGAATTACCCTTCTTTTGTT
TTACATGAGCACTCTGATCCTCATCGGAGCGTGATAATCCAGTAAGTTTT
TGCACTAATGCCATAAAATCTTTAGGATGTGTGTGAATGATTTTAGGAGA
ATGAGTATATATGATGACGGGATGGCGTTGATGGGGCGGCTTGGCGGGTC
CGACAACGCCCAGTGAAGAAGTGGAGGAAGAAGAGGAAGAGGAAGGCGGT
GACGACAAGGAAGAGGAGGAGGATTTCTTGATCATGTGAGAGACCTTGTT
GATTTTCAAAGGAGGAGGACATAACCCATTATTGTTAATGTGGTTAGGTT
TTGCGTGGTGATCATGGAATGGTGTAGGGCTCAT
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mRNA from alignment at Chromosome01:1957364..1958047-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Manes.01G010900.1.v6.1 ID=Manes.01G010900.1.v6.1|Name=Manes.01G010900.1|organism=Manihot esculenta|type=mRNA|length=684bp|location=Sequence derived from alignment at Chromosome01:1957364..1958047- (Manihot esculenta)
ATGAGCCCTACACCATTCCATGATCACCACGCAAAACCTAACCACATTAA CAATAATGGGTTATGTCCTCCTCCTTTGAAAATCAACAAGGTCTCTCACA TGATCAAGAAATCCTCCTCCTCTTCCTTGTCGTCACCGCCTTCCTCTTCC TCTTCTTCCTCCACTTCTTCACTGGGCGTTGTCGGACCCGCCAAGCCGCC CCATCAACGCCATCCCGTCATCATATATACTCATTCTCCTAAAATCATTC ACACACATCCTAAAGATTTTATGGCATTAGTGCAAAAACTTACTGGATTA TCACGCTCCGATGAGGATCAGAGTGCTCATGTAAAACAAAAGAAGGGTAA TTCTTCGCCGGAGGAAGAGAATAATAGCAATGGGAAGAGGGCTGGAAATG GAAACGATGATAATGAATCTTCGTCAGTGATTACAGAAGAAAATTGTGGA AGCATAGGTGATGGACAAGTTAATTCTTGTTTTGTTCCTCCGATTTTTGA GCCTTCAAATCCTTATATGACTAATATTCCGATTTTTACACCAAATTCAG CTGATTTTTTATGTGCAAATCAGCCATTTTATAATTATACAGATTCTTTG TTCTTCACCACTCCTAATATGAGGACGTCCATTTCATCTTCTTCTTCTAC AATGGAGGGGATAAATGAATTTCACGAATATTAG
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Coding sequence (CDS) from alignment at Chromosome01:1957364..1958047-

>Manes.01G010900.1.v6.1 ID=Manes.01G010900.1.v6.1|Name=Manes.01G010900.1|organism=Manihot esculenta|type=CDS|length=684bp|location=Sequence derived from alignment at Chromosome01:1957364..1958047- (Manihot esculenta)
ATGAGCCCTACACCATTCCATGATCACCACGCAAAACCTAACCACATTAA
CAATAATGGGTTATGTCCTCCTCCTTTGAAAATCAACAAGGTCTCTCACA
TGATCAAGAAATCCTCCTCCTCTTCCTTGTCGTCACCGCCTTCCTCTTCC
TCTTCTTCCTCCACTTCTTCACTGGGCGTTGTCGGACCCGCCAAGCCGCC
CCATCAACGCCATCCCGTCATCATATATACTCATTCTCCTAAAATCATTC
ACACACATCCTAAAGATTTTATGGCATTAGTGCAAAAACTTACTGGATTA
TCACGCTCCGATGAGGATCAGAGTGCTCATGTAAAACAAAAGAAGGGTAA
TTCTTCGCCGGAGGAAGAGAATAATAGCAATGGGAAGAGGGCTGGAAATG
GAAACGATGATAATGAATCTTCGTCAGTGATTACAGAAGAAAATTGTGGA
AGCATAGGTGATGGACAAGTTAATTCTTGTTTTGTTCCTCCGATTTTTGA
GCCTTCAAATCCTTATATGACTAATATTCCGATTTTTACACCAAATTCAG
CTGATTTTTTATGTGCAAATCAGCCATTTTATAATTATACAGATTCTTTG
TTCTTCACCACTCCTAATATGAGGACGTCCATTTCATCTTCTTCTTCTAC
AATGGAGGGGATAAATGAATTTCACGAATATTAG
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