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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Chromosome01 | chromosome | Chromosome01:1564326..1566108 - |
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Pacid | 32357095 |
Longest | 1 |
AncestorIdentifier | cassava4.1_007602m.v4.1 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Manes.01G009100.1.v6.1.CDS.1 | Manes.01G009100.1.v6.1.CDS.1 | Manihot esculenta | CDS |
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Manes.01G009100.1.v6.1 ID=Manes.01G009100.1.v6.1|Name=Manes.01G009100.1|organism=Manihot esculenta|type=mRNA|length=1783bp AGTAATTTACTATTTTCTTTTTTCTCAAAAGCAATTTTGGTGGTGAGTGG GAAGAAACATACTATGCCCTACCTCAATATTTTCTTTGATTTTTAAGTAC ATCATATTGCTAGTTTTACTTGGATCTATTAGGGTTTTGTCTTCCATCTA TTTGATTAGCAAAATAACATTGCAGCACACACCATCAGCAATAGCTTCAT ATGCTTTTAACACTCTTCACTACCTTAAAATATATCAAAAAGCTCTCTCA TCTCATGAAACCCAAGTGAATAAGCAAATTCCTCTAACCTCAGATGGTGA CATAACAAACTGAGAATGGAAACCCAGAAAATCCTGCAGGAGTGTGGATA TGGTTCCACTTGGTTGTGCCATTACTGCAATCACTCTCCAAGATGAATGC TCCTTCATAATCACATTCATTACATGAACATGATTTTGATGATGGTGATC TCCTGACACTGCCACTCATCACAAACACACTGTGATTATTATTATTATTA TTAACCTTATCATCATCATCTCCAAGGCTGATCATACAGGGATTTGTTCC AGTTATACGCTCTGGAAGTAGAATTGAATTCACTATTTCCCATCTCATGT TCTCAGTTCCCTTCATTTCTCCACAGATTCTTCTCTGCTGATGTAATTGT TGTTGCTCTCCTCCGAAGAACCACCACCGTTGGAATTGATTTCTGTTTAT ACTAACCATGGCGGTGGCGCCTCTGGGGCTAGTACTTGAAAAGGGCCAAA ACCCATCAACCTTGGACCATGACTCTGTATCTGGGTCATAGAACTCGGCA TCGGACCTGAACTGCCCTTGGGTCTCTGTGCCATAACCACTCACAACCCA GAACCTGGAATCGCCGTCCCAGGCCAGCCCCTGACATTCGTCCCTCTCTT CAATCATATCCGGTAGCTTTCTCCATTCGTTTTTATCAACATCATAAACC TCCGCCGATCGTAAGGCGTTCTTCTGACTGTCGTGGCCTCCGGCCACAAA AACTTTGGATGGTCCAACCAAGGCACAAGCGAAAAACGAGCGTGACACAG ACATTGACGCCCCACGTCTCCACCTGCAGCCATCAGCCCCAGTGAGATCC ACGATGTAAACATCGGGGACAGGTTCTAGAGTGGTGGGATCCCAGCCGCC CAAAAGGAGTACTTTCCCCGACGATGGCAGCGCCAAACACTGACAAAACA TGGGGATCCCTCCCTGAGGCCTTGTCCTTTGCCAAATATCGTGGGTGGCG TTGTAGATGCTCAAAGCAAACTGCGGTGAGCTCTGGATCTGCTTCTCTTC CTTACTGGTTACAGCAGCAGCGGTGGCGGTGGCGGAGGCAGTGGTGAGTG AATCAGTGGAATCCAACTGGGGAAGAGGCTGGACAAGACACACAAGACGC TCAGAAGAACCAGATTTGAGCCTCTGTTGATAAAAAAAAGGATGGGAAAT CAATTTTTGCCAAGAATGGCAAACTGATTTCATATTAGAATGGAATTGAT AAGGGACTCTGATCAGACACTCCATGGCTATTTCATCTGGCAGACCTGGA ATCAACTGCAACTCTTCTTCTTGACATGAGGATTCAGAGACAATCTGGGA TTTATTAACACAAGTGTTCTGTTCTTCTCCCATGTTTCTGAAAACCCACC AAAGATTGAAGGGGAAGATGTTAAAGAAATGCAAGAGTAGCAAGAATCCT GGAGATATATGAAGCTTGTGTGAATGAAATTAGGAGGGATGAGCTGAGAA TCAAATTCAAAATCTGTGGAAGAATGAGAAATT back to topmRNA from alignment at Chromosome01:1564326..1566108- Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >Manes.01G009100.1.v6.1 ID=Manes.01G009100.1.v6.1|Name=Manes.01G009100.1|organism=Manihot esculenta|type=mRNA|length=1783bp|location=Sequence derived from alignment at Chromosome01:1564326..1566108- (Manihot esculenta) AATTTCTCATTCTTCCACAGATTTTGAATTTGATTCTCAGCTCATCCCTC
CTAATTTCATTCACACAAGCTTCATATATCTCCAGGATTCTTGCTACTCT
TGCATTTCTTTAACATCTTCCCCTTCAATCTTTGGTGGGTTTTCAGAAAC
ATGGGAGAAGAACAGAACACTTGTGTTAATAAATCCCAGATTGTCTCTGA
ATCCTCATGTCAAGAAGAAGAGTTGCAGTTGATTCCAGGTCTGCCAGATG
AAATAGCCATGGAGTGTCTGATCAGAGTCCCTTATCAATTCCATTCTAAT
ATGAAATCAGTTTGCCATTCTTGGCAAAAATTGATTTCCCATCCTTTTTT
TTATCAACAGAGGCTCAAATCTGGTTCTTCTGAGCGTCTTGTGTGTCTTG
TCCAGCCTCTTCCCCAGTTGGATTCCACTGATTCACTCACCACTGCCTCC
GCCACCGCCACCGCTGCTGCTGTAACCAGTAAGGAAGAGAAGCAGATCCA
GAGCTCACCGCAGTTTGCTTTGAGCATCTACAACGCCACCCACGATATTT
GGCAAAGGACAAGGCCTCAGGGAGGGATCCCCATGTTTTGTCAGTGTTTG
GCGCTGCCATCGTCGGGGAAAGTACTCCTTTTGGGCGGCTGGGATCCCAC
CACTCTAGAACCTGTCCCCGATGTTTACATCGTGGATCTCACTGGGGCTG
ATGGCTGCAGGTGGAGACGTGGGGCGTCAATGTCTGTGTCACGCTCGTTT
TTCGCTTGTGCCTTGGTTGGACCATCCAAAGTTTTTGTGGCCGGAGGCCA
CGACAGTCAGAAGAACGCCTTACGATCGGCGGAGGTTTATGATGTTGATA
AAAACGAATGGAGAAAGCTACCGGATATGATTGAAGAGAGGGACGAATGT
CAGGGGCTGGCCTGGGACGGCGATTCCAGGTTCTGGGTTGTGAGTGGTTA
TGGCACAGAGACCCAAGGGCAGTTCAGGTCCGATGCCGAGTTCTATGACC
CAGATACAGAGTCATGGTCCAAGGTTGATGGGTTTTGGCCCTTTTCAAGT
ACTAGCCCCAGAGGCGCCACCGCCATGGTTAGTATAAACAGAAATCAATT
CCAACGGTGGTGGTTCTTCGGAGGAGAGCAACAACAATTACATCAGCAGA
GAAGAATCTGTGGAGAAATGAAGGGAACTGAGAACATGAGATGGGAAATA
GTGAATTCAATTCTACTTCCAGAGCGTATAACTGGAACAAATCCCTGTAT
GATCAGCCTTGGAGATGATGATGATAAGGTTAATAATAATAATAATAATC
ACAGTGTGTTTGTGATGAGTGGCAGTGTCAGGAGATCACCATCATCAAAA
TCATGTTCATGTAATGAATGTGATTATGAAGGAGCATTCATCTTGGAGAG
TGATTGCAGTAATGGCACAACCAAGTGGAACCATATCCACACTCCTGCAG
GATTTTCTGGGTTTCCATTCTCAGTTTGTTATGTCACCATCTGAGGTTAG
AGGAATTTGCTTATTCACTTGGGTTTCATGAGATGAGAGAGCTTTTTGAT
ATATTTTAAGGTAGTGAAGAGTGTTAAAAGCATATGAAGCTATTGCTGAT
GGTGTGTGCTGCAATGTTATTTTGCTAATCAAATAGATGGAAGACAAAAC
CCTAATAGATCCAAGTAAAACTAGCAATATGATGTACTTAAAAATCAAAG
AAAATATTGAGGTAGGGCATAGTATGTTTCTTCCCACTCACCACCAAAAT
TGCTTTTGAGAAAAAAGAAAATAGTAAATTACT back to topCoding sequence (CDS) from alignment at Chromosome01:1564326..1566108- >Manes.01G009100.1.v6.1 ID=Manes.01G009100.1.v6.1|Name=Manes.01G009100.1|organism=Manihot esculenta|type=CDS|length=1344bp|location=Sequence derived from alignment at Chromosome01:1564326..1566108- (Manihot esculenta) ATGGGAGAAGAACAGAACACTTGTGTTAATAAATCCCAGATTGTCTCTGA ATCCTCATGTCAAGAAGAAGAGTTGCAGTTGATTCCAGGTCTGCCAGATG AAATAGCCATGGAGTGTCTGATCAGAGTCCCTTATCAATTCCATTCTAAT ATGAAATCAGTTTGCCATTCTTGGCAAAAATTGATTTCCCATCCTTTTTT TTATCAACAGAGGCTCAAATCTGGTTCTTCTGAGCGTCTTGTGTGTCTTG TCCAGCCTCTTCCCCAGTTGGATTCCACTGATTCACTCACCACTGCCTCC GCCACCGCCACCGCTGCTGCTGTAACCAGTAAGGAAGAGAAGCAGATCCA GAGCTCACCGCAGTTTGCTTTGAGCATCTACAACGCCACCCACGATATTT GGCAAAGGACAAGGCCTCAGGGAGGGATCCCCATGTTTTGTCAGTGTTTG GCGCTGCCATCGTCGGGGAAAGTACTCCTTTTGGGCGGCTGGGATCCCAC CACTCTAGAACCTGTCCCCGATGTTTACATCGTGGATCTCACTGGGGCTG ATGGCTGCAGGTGGAGACGTGGGGCGTCAATGTCTGTGTCACGCTCGTTT TTCGCTTGTGCCTTGGTTGGACCATCCAAAGTTTTTGTGGCCGGAGGCCA CGACAGTCAGAAGAACGCCTTACGATCGGCGGAGGTTTATGATGTTGATA AAAACGAATGGAGAAAGCTACCGGATATGATTGAAGAGAGGGACGAATGT CAGGGGCTGGCCTGGGACGGCGATTCCAGGTTCTGGGTTGTGAGTGGTTA TGGCACAGAGACCCAAGGGCAGTTCAGGTCCGATGCCGAGTTCTATGACC CAGATACAGAGTCATGGTCCAAGGTTGATGGGTTTTGGCCCTTTTCAAGT ACTAGCCCCAGAGGCGCCACCGCCATGGTTAGTATAAACAGAAATCAATT CCAACGGTGGTGGTTCTTCGGAGGAGAGCAACAACAATTACATCAGCAGA GAAGAATCTGTGGAGAAATGAAGGGAACTGAGAACATGAGATGGGAAATA GTGAATTCAATTCTACTTCCAGAGCGTATAACTGGAACAAATCCCTGTAT GATCAGCCTTGGAGATGATGATGATAAGGTTAATAATAATAATAATAATC ACAGTGTGTTTGTGATGAGTGGCAGTGTCAGGAGATCACCATCATCAAAA TCATGTTCATGTAATGAATGTGATTATGAAGGAGCATTCATCTTGGAGAG TGATTGCAGTAATGGCACAACCAAGTGGAACCATATCCACACTCCTGCAG GATTTTCTGGGTTTCCATTCTCAGTTTGTTATGTCACCATCTGA back to top
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