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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Chromosome01 | chromosome | Chromosome01:1213545..1217644 - |
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Pacid | 32359623 |
Longest | 0 |
AncestorIdentifier | cassava4.1_002735m.v4.1 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Manes.01G007300.3.v6.1.CDS.3 | Manes.01G007300.3.v6.1.CDS.3 | Manihot esculenta | CDS |
Manes.01G007300.3.v6.1.CDS.2 | Manes.01G007300.3.v6.1.CDS.2 | Manihot esculenta | CDS |
Manes.01G007300.3.v6.1.CDS.1 | Manes.01G007300.3.v6.1.CDS.1 | Manihot esculenta | CDS |
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Manes.01G007300.3.v6.1 ID=Manes.01G007300.3.v6.1|Name=Manes.01G007300.3|organism=Manihot esculenta|type=mRNA|length=4100bp GGAAAAAGTTGTTATTTTTAGAGTTCTCATATCTAAAATATGTCAAATTC AACTCTAAATCAACTTTTAATACACTCTAACCAACATTTTTTTTTAAAAA AAAAAGTGTTCTACTCAACATCACTTTCAATTGCAGTGCCAATAGACTCT AACTTGCTATTGCAAAATCATATTAGGCATGTCTACCACATGCAATCTAG ACTTTTTATTAAGAAAACAAACCATGAAATTAAATATCTGGCATACTTAA TGGTATTTCTCCCAGAGACATGTAAATCGAGTCATCATCACCAAGAGTCC CCTGAAACAACCAGGATAAGAAAAAATAAGTTAATCAAGAACTGCATTAA GAAATGCAGAGTAATGCATTGCAATATTGCACTAAATGATAGTATTTATA GAATTAACCATTTAAGAACAAAATTTGACAAGCATCAAAAACAGAACCCA GTAAGCATCAGTGCATATAAGATGAATAGTTAAATAAGAAAGCAGAGGGT TAATTCAAGGACAAACTAAAATTTAATCTACTTGTCGGCACTTGGAATTT TCTTAAGGAAAATATCAAATTTCACTCCTGAAATTAGGGTTCGAGATAAT GAAATTCAGTAACAAAAATCATGTCGTAAAGAAGACTATTTCTATAGTAC CTCTCCATTATGAAGACTCATCTCATTCTGCAGTGGGTTGATGTCCTCTG CTGCAGAAGGACAGTTTGAAAAAGTGGTAAGGAACTCCGAAATCATAAGA CCATCATAGCCATCTGGAACCTCGGTTATATCTCCAGCGTTCTGTGCATT ATTGGGAAGCACCTCTGTGCCAGTAAATGTTGTTTCCCTGAATAACTAAA ATACTTAGACCAAAAACAGAAATGCAAACTTTGCAGAAACTAACAATTGC GTCTCACTTACGAACTAGAACCAACACAGGAGAAGAGTAATAGACTATAT ATTTTCATTTGAGAAGTTGAGAAACATATAGAATAAGAAAATAATGATAA GAGGGACATACTCTTGCTGTGAATTATCAAAAGCCTTATCTCCTGAGTTG GAATCATTCTCCAAATCAATGACTTCAATATGTTTGCCATTATTTGCATT GCTTATTGACAAATCAATGTCAACCTGTGCTGCTTCCTTTTTGCTTGCTG GAATAGACGGGTACACGAGGATTGGATCATTACAATGATAATCATTCATA TCAGCAGCCTCCATTAAATTGAGGTCACAGATCTTAAACGAACTCGGAAA AAGTTGTTTCTCTTGTGTGTACCCGAAACTTGGTTCACTACCTGCGTTTT GAAATTGATGACTATGAAACGAGCGGTCTCGAGTGACAGCAATACTTACT GGATGATCAGGTGAAGGCTTCCCCGCTTGTGAGCTATCTTGGTCTTGACT AAAATTAGAGAGATGAAGCTGGTCATTGGCTGTACTAACCAATGATGGAA AACATTCTCTAGGCTTCTTGGTTGCCTCATTCATATCAGAATCTTCAGCA GTTCGTTTCTCACCTCTCTCCTTAACTGACATGGACCTTCCAAAGCTCGC CATCCCCTGACTTAATTCTTGCTTGCTGTCACACATAAAAGCCCTAGCTG GAAAGGATTGAGACCTCATGCATTTACCCTTGCCAGAAACAAATGGGGGG CCTATTTCTCCAATATCCCCATCAGAATGTACAGGCACTACTACTTTAGA CATTTCAACATCACATTTTGCATCGTTAGTTGTATTTGGCAGTGAATCAC CCATTGAGAAATCAAGAGTGCCATCTGGAACTGAGACTTCAGATCCTTTG GGAGGCTCAACATCAGATGGATTTTCCTCTTCCTTGTTAGGAACTTGTTC AACCTTGGGGACCCTGTACGTCAATGAAGACCGTGTTTTAGTAGGGACCT TCACAAATTTGCAGAATGTTAGTAAATCAGATCCATGCTTGCTAGAGAGA TCACCATCCACTGCAAAGGACTGGATATGTGAGTCCTCAGAAATAATTAG TTTCTCAGTTTCATGCCTATGATTGTAATCCATCTCCTTCCCAGAATTCA ATTTTGCCAAATCAACAGACGCCTTGGAAGGTTCCGCATCAGTCTCATCT TTCTCAATGATAAAAGAATTTTCCTTGGAACCCATGTCATCTTTGAACTC TTCTCCTGATTCAATTTCAGTTGCTTCCTCACTTTCTGGTGCTGACCCAC ACTGACCAAACTTCCCATCAACATCTTCACCAACTTGATGCTCTTCATAA TGTTCAGAAATTGAATCATCATCCCCCTCCGTATCAAGTGACATCTGATT TCGATCTGACCACCACCCGCTCCTCCCATATTCTCTGCCCCAATCCGAGC TATAATTCCGATGATAATTCTCTCCTCTCCTCCTACCTTTTACATGATTT CTCGAATTGAAGTCATCAGAATGCCTTCTCCTACCTGTTCCAGCATCAGA AACAACACTTCCTAGGCGGAAACGGGCAGATGTTCGGCCCTCCTGTGCAA AGTCCTCTTGTACCCTAAAATCCTGATAGTCTCCAGCTTGCTTCCTTAAA CTACCATTCTGCCACTTACCAGAAAGTGCATTCTCAGGTAACAATCCCTT GGACACTAAATATTCAGCTGCAAGTCTACCCGCTTCCATCAAAATATCTC CTTTGCGTGTTGGTGGCTGAGGTGGCTGTTGAAAAGATTTGGGCTGAACC TGGCCACGGCCAAAGCCCCGATTATTGAAGCTTCTGTATTCAGAATTGTA AAAGCCATAGCCTCTGGCTGAGGTATCTGGGGATATCCTCGAGGCACCCA TCCCCATCGAACTAGACCTGTACCCATTTCCAGGACTTCGGTGCCTAGCA TGCATCTTTGGCTTCCTGATTATTCTCAAAACTACAACAATCAATCAAAG TTTAAGAGAAAATAGCAGGTCCTTGTAGCTCCCATACATCGAGGACAGGT TGCACAGAAATAAGAAATTGCGATCAAGTAAAGCTTTCAATTAGGTACTC ATAAATTAAATAATAAGGTTTTATCCGGTTAAAGACGAGCAAATTAACCC AGCAATAAATTGTAGAGCCAAAATGGCAGCTAACTGGTGCTTAACAATCA ATACATGTAGTAATCTAATTCTTTTGCGCACTTTTGAGGTCAAGGAATCA AAGAGTCAAAATCAACCAATCCAAGAGTAAAAAACCAAGAAATGAGATAG ACAGAAATCAGAGGTGATCTTGGCTCCAAGGACAGTAAATATCTGACCTT TCCTTCGTTCTCTGTTTTTGGGTCTTCACCTGAGGCTGTCTATTCGTTTT TTATGTTTGTCGACCAAGAAGAAAAGAAAATTCAGCTCTGGTCATGTTAG TGTGCCAGATCCAAGTAGGCCAGATTTATGGCCACCCCCTCTACCTACCT CAACACTTCATCATCTACATCAAACCTAAAAGAAGCCCTAAATTTTCCAA TTGAAGACTTATTAAAATCTTCCACGATGCAAAGGTAATTGCTTTAGGTC AAAAGGAAAAAATCTTGCAGCAATCAGAAAGTTTGATGCTTTCTGCAGCC AAGCAGACAAGGAATACTAAACAGTACCATAACATCCATCCATGGCCGTT ACAGTAGCTGACAAACCTCGACTTGGCCCTAAAATAAGATTACTCGTGGC TTTTTTCAACAGAAAATGTACCGGTAACCTGTAAATTCCAGTTGCACAAA ACCCCAACACCTCTTTTTTGGTAAAAGCGAGAAGAAAACAAAACAAATCA ACACAACTAGAGAGCTTCAGTGCACGAGACCATCGAATCGTCTTCTGTTC GCAATTGGATAAGAACAATGACAATTCCAGTTATTGGATTATGTTAATTC TGAGATTCCTCCTCCTCCTACCCAACTCACCATCTCACTTCAATTTGATT TTGTTCGATAATAAACTCTCCTTCCACTCCATTCCTGTACAGCTTTGTAT CAACACCCATTTCGCAATTGATCCCAGATATCCACCTAAATTGAGGTTTG AGGAGTTGAATTTCCGGCGAAACCAGGTCCAGTGGAGACAGAAGTGTATT AAGCAACGTCGTCTGTAGAGTTTCGGTTTAGGTCTCAGAGTGACTTTTCG back to topmRNA from alignment at Chromosome01:1213545..1217644- Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >Manes.01G007300.3.v6.1 ID=Manes.01G007300.3.v6.1|Name=Manes.01G007300.3|organism=Manihot esculenta|type=mRNA|length=4100bp|location=Sequence derived from alignment at Chromosome01:1213545..1217644- (Manihot esculenta) CGAAAAGTCACTCTGAGACCTAAACCGAAACTCTACAGACGACGTTGCTT
AATACACTTCTGTCTCCACTGGACCTGGTTTCGCCGGAAATTCAACTCCT
CAAACCTCAATTTAGGTGGATATCTGGGATCAATTGCGAAATGGGTGTTG
ATACAAAGCTGTACAGGAATGGAGTGGAAGGAGAGTTTATTATCGAACAA
AATCAAATTGAAGTGAGATGGTGAGTTGGGTAGGAGGAGGAGGAATCTCA
GAATTAACATAATCCAATAACTGGAATTGTCATTGTTCTTATCCAATTGC
GAACAGAAGACGATTCGATGGTCTCGTGCACTGAAGCTCTCTAGTTGTGT
TGATTTGTTTTGTTTTCTTCTCGCTTTTACCAAAAAAGAGGTGTTGGGGT
TTTGTGCAACTGGAATTTACAGGTTACCGGTACATTTTCTGTTGAAAAAA
GCCACGAGTAATCTTATTTTAGGGCCAAGTCGAGGTTTGTCAGCTACTGT
AACGGCCATGGATGGATGTTATGGTACTGTTTAGTATTCCTTGTCTGCTT
GGCTGCAGAAAGCATCAAACTTTCTGATTGCTGCAAGATTTTTTCCTTTT
GACCTAAAGCAATTACCTTTGCATCGTGGAAGATTTTAATAAGTCTTCAA
TTGGAAAATTTAGGGCTTCTTTTAGGTTTGATGTAGATGATGAAGTGTTG
AGGTAGGTAGAGGGGGTGGCCATAAATCTGGCCTACTTGGATCTGGCACA
CTAACATGACCAGAGCTGAATTTTCTTTTCTTCTTGGTCGACAAACATAA
AAAACGAATAGACAGCCTCAGGTGAAGACCCAAAAACAGAGAACGAAGGA
AAGGTCAGATATTTACTGTCCTTGGAGCCAAGATCACCTCTGATTTCTGT
CTATCTCATTTCTTGGTTTTTTACTCTTGGATTGGTTGATTTTGACTCTT
TGATTCCTTGACCTCAAAAGTGCGCAAAAGAATTAGATTACTACATGTAT
TGATTGTTAAGCACCAGTTAGCTGCCATTTTGGCTCTACAATTTATTGCT
GGGTTAATTTGCTCGTCTTTAACCGGATAAAACCTTATTATTTAATTTAT
GAGTACCTAATTGAAAGCTTTACTTGATCGCAATTTCTTATTTCTGTGCA
ACCTGTCCTCGATGTATGGGAGCTACAAGGACCTGCTATTTTCTCTTAAA
CTTTGATTGATTGTTGTAGTTTTGAGAATAATCAGGAAGCCAAAGATGCA
TGCTAGGCACCGAAGTCCTGGAAATGGGTACAGGTCTAGTTCGATGGGGA
TGGGTGCCTCGAGGATATCCCCAGATACCTCAGCCAGAGGCTATGGCTTT
TACAATTCTGAATACAGAAGCTTCAATAATCGGGGCTTTGGCCGTGGCCA
GGTTCAGCCCAAATCTTTTCAACAGCCACCTCAGCCACCAACACGCAAAG
GAGATATTTTGATGGAAGCGGGTAGACTTGCAGCTGAATATTTAGTGTCC
AAGGGATTGTTACCTGAGAATGCACTTTCTGGTAAGTGGCAGAATGGTAG
TTTAAGGAAGCAAGCTGGAGACTATCAGGATTTTAGGGTACAAGAGGACT
TTGCACAGGAGGGCCGAACATCTGCCCGTTTCCGCCTAGGAAGTGTTGTT
TCTGATGCTGGAACAGGTAGGAGAAGGCATTCTGATGACTTCAATTCGAG
AAATCATGTAAAAGGTAGGAGGAGAGGAGAGAATTATCATCGGAATTATA
GCTCGGATTGGGGCAGAGAATATGGGAGGAGCGGGTGGTGGTCAGATCGA
AATCAGATGTCACTTGATACGGAGGGGGATGATGATTCAATTTCTGAACA
TTATGAAGAGCATCAAGTTGGTGAAGATGTTGATGGGAAGTTTGGTCAGT
GTGGGTCAGCACCAGAAAGTGAGGAAGCAACTGAAATTGAATCAGGAGAA
GAGTTCAAAGATGACATGGGTTCCAAGGAAAATTCTTTTATCATTGAGAA
AGATGAGACTGATGCGGAACCTTCCAAGGCGTCTGTTGATTTGGCAAAAT
TGAATTCTGGGAAGGAGATGGATTACAATCATAGGCATGAAACTGAGAAA
CTAATTATTTCTGAGGACTCACATATCCAGTCCTTTGCAGTGGATGGTGA
TCTCTCTAGCAAGCATGGATCTGATTTACTAACATTCTGCAAATTTGTGA
AGGTCCCTACTAAAACACGGTCTTCATTGACGTACAGGGTCCCCAAGGTT
GAACAAGTTCCTAACAAGGAAGAGGAAAATCCATCTGATGTTGAGCCTCC
CAAAGGATCTGAAGTCTCAGTTCCAGATGGCACTCTTGATTTCTCAATGG
GTGATTCACTGCCAAATACAACTAACGATGCAAAATGTGATGTTGAAATG
TCTAAAGTAGTAGTGCCTGTACATTCTGATGGGGATATTGGAGAAATAGG
CCCCCCATTTGTTTCTGGCAAGGGTAAATGCATGAGGTCTCAATCCTTTC
CAGCTAGGGCTTTTATGTGTGACAGCAAGCAAGAATTAAGTCAGGGGATG
GCGAGCTTTGGAAGGTCCATGTCAGTTAAGGAGAGAGGTGAGAAACGAAC
TGCTGAAGATTCTGATATGAATGAGGCAACCAAGAAGCCTAGAGAATGTT
TTCCATCATTGGTTAGTACAGCCAATGACCAGCTTCATCTCTCTAATTTT
AGTCAAGACCAAGATAGCTCACAAGCGGGGAAGCCTTCACCTGATCATCC
AGTAAGTATTGCTGTCACTCGAGACCGCTCGTTTCATAGTCATCAATTTC
AAAACGCAGGTAGTGAACCAAGTTTCGGGTACACACAAGAGAAACAACTT
TTTCCGAGTTCGTTTAAGATCTGTGACCTCAATTTAATGGAGGCTGCTGA
TATGAATGATTATCATTGTAATGATCCAATCCTCGTGTACCCGTCTATTC
CAGCAAGCAAAAAGGAAGCAGCACAGGTTGACATTGATTTGTCAATAAGC
AATGCAAATAATGGCAAACATATTGAAGTCATTGATTTGGAGAATGATTC
CAACTCAGGAGATAAGGCTTTTGATAATTCACAGCAAGAGTATGTCCCTC
TTATCATTATTTTCTTATTCTATATGTTTCTCAACTTCTCAAATGAAAAT
ATATAGTCTATTACTCTTCTCCTGTGTTGGTTCTAGTTCGTAAGTGAGAC
GCAATTGTTAGTTTCTGCAAAGTTTGCATTTCTGTTTTTGGTCTAAGTAT
TTTAGTTATTCAGGGAAACAACATTTACTGGCACAGAGGTGCTTCCCAAT
AATGCACAGAACGCTGGAGATATAACCGAGGTTCCAGATGGCTATGATGG
TCTTATGATTTCGGAGTTCCTTACCACTTTTTCAAACTGTCCTTCTGCAG
CAGAGGACATCAACCCACTGCAGAATGAGATGAGTCTTCATAATGGAGAG
GTACTATAGAAATAGTCTTCTTTACGACATGATTTTTGTTACTGAATTTC
ATTATCTCGAACCCTAATTTCAGGAGTGAAATTTGATATTTTCCTTAAGA
AAATTCCAAGTGCCGACAAGTAGATTAAATTTTAGTTTGTCCTTGAATTA
ACCCTCTGCTTTCTTATTTAACTATTCATCTTATATGCACTGATGCTTAC
TGGGTTCTGTTTTTGATGCTTGTCAAATTTTGTTCTTAAATGGTTAATTC
TATAAATACTATCATTTAGTGCAATATTGCAATGCATTACTCTGCATTTC
TTAATGCAGTTCTTGATTAACTTATTTTTTCTTATCCTGGTTGTTTCAGG
GGACTCTTGGTGATGATGACTCGATTTACATGTCTCTGGGAGAAATACCA
TTAAGTATGCCAGATATTTAATTTCATGGTTTGTTTTCTTAATAAAAAGT
CTAGATTGCATGTGGTAGACATGCCTAATATGATTTTGCAATAGCAAGTT
AGAGTCTATTGGCACTGCAATTGAAAGTGATGTTGAGTAGAACACTTTTT
TTTTTAAAAAAAAATGTTGGTTAGAGTGTATTAAAAGTTGATTTAGAGTT
GAATTTGACATATTTTAGATATGAGAACTCTAAAAATAACAACTTTTTCC
back to topCoding sequence (CDS) from alignment at Chromosome01:1213545..1217644- >Manes.01G007300.3.v6.1 ID=Manes.01G007300.3.v6.1|Name=Manes.01G007300.3|organism=Manihot esculenta|type=CDS|length=2103bp|location=Sequence derived from alignment at Chromosome01:1213545..1217644- (Manihot esculenta) ATGCATGCTAGGCACCGAAGTCCTGGAAATGGGTACAGGTCTAGTTCGAT GGGGATGGGTGCCTCGAGGATATCCCCAGATACCTCAGCCAGAGGCTATG GCTTTTACAATTCTGAATACAGAAGCTTCAATAATCGGGGCTTTGGCCGT GGCCAGGTTCAGCCCAAATCTTTTCAACAGCCACCTCAGCCACCAACACG CAAAGGAGATATTTTGATGGAAGCGGGTAGACTTGCAGCTGAATATTTAG TGTCCAAGGGATTGTTACCTGAGAATGCACTTTCTGGTAAGTGGCAGAAT GGTAGTTTAAGGAAGCAAGCTGGAGACTATCAGGATTTTAGGGTACAAGA GGACTTTGCACAGGAGGGCCGAACATCTGCCCGTTTCCGCCTAGGAAGTG TTGTTTCTGATGCTGGAACAGGTAGGAGAAGGCATTCTGATGACTTCAAT TCGAGAAATCATGTAAAAGGTAGGAGGAGAGGAGAGAATTATCATCGGAA TTATAGCTCGGATTGGGGCAGAGAATATGGGAGGAGCGGGTGGTGGTCAG ATCGAAATCAGATGTCACTTGATACGGAGGGGGATGATGATTCAATTTCT GAACATTATGAAGAGCATCAAGTTGGTGAAGATGTTGATGGGAAGTTTGG TCAGTGTGGGTCAGCACCAGAAAGTGAGGAAGCAACTGAAATTGAATCAG GAGAAGAGTTCAAAGATGACATGGGTTCCAAGGAAAATTCTTTTATCATT GAGAAAGATGAGACTGATGCGGAACCTTCCAAGGCGTCTGTTGATTTGGC AAAATTGAATTCTGGGAAGGAGATGGATTACAATCATAGGCATGAAACTG AGAAACTAATTATTTCTGAGGACTCACATATCCAGTCCTTTGCAGTGGAT GGTGATCTCTCTAGCAAGCATGGATCTGATTTACTAACATTCTGCAAATT TGTGAAGGTCCCTACTAAAACACGGTCTTCATTGACGTACAGGGTCCCCA AGGTTGAACAAGTTCCTAACAAGGAAGAGGAAAATCCATCTGATGTTGAG CCTCCCAAAGGATCTGAAGTCTCAGTTCCAGATGGCACTCTTGATTTCTC AATGGGTGATTCACTGCCAAATACAACTAACGATGCAAAATGTGATGTTG AAATGTCTAAAGTAGTAGTGCCTGTACATTCTGATGGGGATATTGGAGAA ATAGGCCCCCCATTTGTTTCTGGCAAGGGTAAATGCATGAGGTCTCAATC CTTTCCAGCTAGGGCTTTTATGTGTGACAGCAAGCAAGAATTAAGTCAGG GGATGGCGAGCTTTGGAAGGTCCATGTCAGTTAAGGAGAGAGGTGAGAAA CGAACTGCTGAAGATTCTGATATGAATGAGGCAACCAAGAAGCCTAGAGA ATGTTTTCCATCATTGGTTAGTACAGCCAATGACCAGCTTCATCTCTCTA ATTTTAGTCAAGACCAAGATAGCTCACAAGCGGGGAAGCCTTCACCTGAT CATCCAGTAAGTATTGCTGTCACTCGAGACCGCTCGTTTCATAGTCATCA ATTTCAAAACGCAGGTAGTGAACCAAGTTTCGGGTACACACAAGAGAAAC AACTTTTTCCGAGTTCGTTTAAGATCTGTGACCTCAATTTAATGGAGGCT GCTGATATGAATGATTATCATTGTAATGATCCAATCCTCGTGTACCCGTC TATTCCAGCAAGCAAAAAGGAAGCAGCACAGGTTGACATTGATTTGTCAA TAAGCAATGCAAATAATGGCAAACATATTGAAGTCATTGATTTGGAGAAT GATTCCAACTCAGGAGATAAGGCTTTTGATAATTCACAGCAAGAGGAAAC AACATTTACTGGCACAGAGGTGCTTCCCAATAATGCACAGAACGCTGGAG ATATAACCGAGGTTCCAGATGGCTATGATGGTCTTATGATTTCGGAGTTC CTTACCACTTTTTCAAACTGTCCTTCTGCAGCAGAGGACATCAACCCACT GCAGAATGAGATGAGTCTTCATAATGGAGAGGGGACTCTTGGTGATGATG ACTCGATTTACATGTCTCTGGGAGAAATACCATTAAGTATGCCAGATATT TAA back to top
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