|
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Chromosome01 | chromosome | Chromosome01:1135435..1139652 - |
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Pacid | 32359297 |
Longest | 1 |
AncestorIdentifier | cassava4.1_017754m.v4.1 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Manes.01G006300.1.v6.1.CDS.3 | Manes.01G006300.1.v6.1.CDS.3 | Manihot esculenta | CDS |
Manes.01G006300.1.v6.1.CDS.2 | Manes.01G006300.1.v6.1.CDS.2 | Manihot esculenta | CDS |
Manes.01G006300.1.v6.1.CDS.1 | Manes.01G006300.1.v6.1.CDS.1 | Manihot esculenta | CDS |
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Manes.01G006300.1.v6.1 ID=Manes.01G006300.1.v6.1|Name=Manes.01G006300.1|organism=Manihot esculenta|type=mRNA|length=4218bp AAGAAATGAAACTGGAGGAGTCGTTGTATTTAAATTTTGAAGTACATATA GCTCTAAGTGTTGAATCATTAATCACTCAATACAACCAAGCACTAAAACC TACCACTTGGGCAGCAAATCACAAACCAATATACAAATTAAATTTTCACA ATGCCTGACGGATGAATTTAACTCTAGCACAAATACAATGAAATAACAAA GAAGGTAATAATGGTTAAGAATATAATTCAATTATTGGAGAATAAATATA TAATCAACATTTCAAGCCTTCAAAACAAGTGAACTAACAACACTAGGAAG CTAGATGTGAGCATCAGCAGCAGGGATGGATAGCGAATAATCTGACTCCC ACTATCATTAGCCAACTGTGAAGGCGCCAGTGCAGGGCATGCGAGCCCCA GTTTCCCTTCTCGGCATTCACTAGCGAAAAGGCCAGGTGGGTATTTTCCG TTTAGGTTAATGTAGCTGAACATGGTTGACGCACAATCATTGGTCAAATC ATTCAAATAATCAGCATAAGGACAAGCAAAGTCCTTGAATGCTTTACAAC ATGGATCACGAGGATACTTAGGTCCTTTACATTGGCTCGTGAGGACTGTA TAGTTCAGAAACTCGAAGTTTAATGGGCAGGCTGCAGAGAAGGTAACATA ACATTAGATTATCAGAATGTGATTCTATAATATAATGCTAAAGCATAATT AATTGTGGAACAGAATTGCTAGGGGTATTTGGCAGTGGTTTCTATGATAT CTTTGATTTTTTTGAATATTTTGAACACAAAAAAAAAATGGATTACAGCA CCCATCTTTTTATCGAAAACGGACAAATCAATAAAAAAATGTACATATGC AGATCAAAGATCATCAAAGATAAACACAACCATCACTTGCATATGTAGAT AACCGAGCAATCATTGTGACAGGTTACAAAGCCAAGACCAGACTACGGGC CTGAATGGAAAGGAAGTATAATCAACATGTCCAAGAGCATATATAAAATA ATTTCATTAACATTGTATCATCAATGTAGATGTATGCATGAAACTAGGAA TTAATCAATTCAGAAAATTTAATAATCACTAAAACAAGAAGATTGGGAAA ACATTGGAAATTATCGTCACAAAGGCTATAGCAAAGAATTTGTTATCAGC TAAAATGCCAAATTTAGCCCTGAACCATACTGCAGGGGCCAAAAATGTTA AATTTCATTTTTTTAGCCCAAATTTGCCTTTAAACTATCATAATAAGTAG AAATAATGCCATCACTTATAAGGATTTACAGAGAATAAGCCAAATAGACT GTAAAGAGTGTAGCTCATTCTCTTTAAATCCTTACAAGTGATGGATGATA GTTAAGGGACAAATTTGGACCAAAAAAAAAAAATTTGGCATTTGACACTT GCTGTACAGTTCAGGGGCAATTTAGGCCCTTTTGCCATTTGTCATCCTTT GAATTAGATTTCCTCAGTTGAACATTTTGAATTCATCCATTTTTTACACT ACAAATCTCCAAAATTAAAATTTCAATCTACCACATAATTTTGAACCATG AACGTAATGCACTACTCTCTAAAAGCCTACAAGTCTCACAAATCGTTTAG GTTATCTTTGGGAGAGGGAGGAAAATGTATAATAGAGTGAAAATGAAAGG AAATGGAAGGAAGAAAGAAAAAGGGACCCACATTACAAAGGAAAAGAAAT GTAAGCATTTCATGTTCTATTTTCTTCATATGTCATTTCCCCTCATTTTC CTCTTCTTCCAAAAAAAGCCTTTGGACAAGGTGAGGGAATTTAATAGAGG GATAAAGGAAGGTACAGAGGAGGAAGGGTAAGGAAGGTTGCAATAATAAT AATAATAAATTACATGTTTCGAAAGGGATAAATTAATAGGAAGATAAGAG AGGGTAATAAATATTAAAATTTAAATAATTGTCCTATTTCCTTCTCCTCA AACTCCAATTTGATGTGTAAGAAAAATTGGCATTTGAGGTGTAAAGCAAG GTAAAGCTTACTATTTCTTGTCTTTGTTTACACCTCCTTCACCTCTTTCC AGATAGGGGGTACATATATTACTTACCTCTCATTACCTTTATTTACCCTC TTTCCCCTCCAACCAAACATAGTCTAAATAGAAGCCAATATTTGCTTCGT CCTACATTATATTTTGACTTCATTAACACAGGATACATATCGACCTAAGT GTACTTGATGGGAAAAAAAAAAACAATTGCCAAAGCATGGAGATTAAGGA CTTTAGAGAAGTCCAAATTGTACTTCCAAATATCAACATGCAAATGGCTT TATTTGATGAATAATGAACTGTTTCTATAAAGTCTTGTGAATTCACAATG TAACTTTAGAATGACATGCACATGCAAATGCAAATTCTGGTTTTCAAGTC ATACAGTCATACTAGTGGAAAATTCATCCTAACATATATAGGACAGGTTG TGGAACCGGCTCAGCAATGCTTCGATGGTGAACAATTCTCAAACAACTGG TAGGGTTTTAGAACTTTTGATTTAATGAGAAAGGGGAATTTAGTATTAGG AAATTGAACTACAGTTTGTTAGAGATAAATAAATAGAAATTAGAGATTGT TGGGGCTGTGAACATTATCTGACCTAATTTAGCAGCAGAGGAAAAGGTGG CAGAAGCCTGAAGAATGGAAGGACAGAAGTACTAGAATGAAAGGGGCAGG GGGAGGAGAGAGAGAGAGAGAGAGAGCAGAGCAGTAGTAGTAGGAATCAA ACATTTGAAATCAAATGTTTAACACATCAAAACATAAGAAAATAACTAAG TTACATAGATTTTGTTGAGATTTAATATTTTATCATACCAAACCAATACA AAATATGATAGGAAGCAAACAATTTTCTAAATATTCCTAATGCTAAGTTC CTAAATAATAGTAAAACCAATACTTCCTACATAAAAACTTAGAAAAAAGA TTGGATTGCAGACAGAGTAAACCCAAAACTTGCTAAATTTAATTGTCTTG ACTGCATCAATAACTTATGCAAGCACGTTACCAAATTTCAAACACTATGG TGCAATATATAAATGCACAAGAGAAACAATGAACCCACAACCTCATATAG CTGACTTGATGAGCAATGTTCAAATGAAATATCACTTGACAACAAATTAT ATTAGTAAATTCAAATCGGCTGATAAAAGCAAAATTGCATGAAATCAGAT GGCATTTTATATTAATTAAGTAATTGCCTTCCTCCTCAGGCTAACTTCTT TTTCATTTTTCCAATGAATCAACATCTTGAGTAAAGCCGCTATGAATTTT AAAGGAAAATAACTGCTCTATCAGCTAGTAACTGATCAGAAATCCCTATT TGTAGGGTTGGTAACTTATAATTAGAAGGCAATCAATTAAATTTATGCTA GAACAGAGATAAACAACAGAAAAAAAAAAAGAAGCAATGATCTCACTGTT AAAGCAACAGGGTAACTTTGGAGGCTTGAACAAACAAATTCAGCCTTAAA CAAATTATTGAGCACAAAAATCAACCAAGTTATAGAAATTCACAAAACAT AATTCTCATTTCAGAACATAATTTCTTGATTTCTAGGCTGAAAAATGATG CATAATTAAACAACTCAAAGCACTTAGATCACATAAGAACAGTATTATAA CAAAACCCACAAAGGAAATCCAAGATTAAACCCAATCCAAAAAATAATAA TTAGAGAAATGTGAATAAGAAGAAAGAAAAGAAAAGAAAAGAAACCTTTC TTAGCCTGAAGCAGATTCCTGCCTGTGGAATCATGGGATTGAAAAACAGA ATCTGGATCCGAATCAGCAACAGCACAAAATCAAGTTCTAGAAAACAAAA AATCAAAGTCTAGTATGTGCGTACATGATAAATTCCTTAAAATACCTGAA ATAGAACTGGAAGCAGAAGGAGGAGCAAAGGCAACAATCAACAGAAGAAA GAAGAGAAATAAAGAAAACCGATTCAGTGCCATCTTTGCTTATTTCATAT ACATATGAAAAGGAGAGATCTGCCCTCTGCAACTCGTCTTTCTTTTCTTG TAAAAGAAAGTTGAAAGCTTTAAGGATGAAATGCAAGGGTAGGAGGTGAT GATGGAGAAGTGGGTGACAGCAAATAACGCCGAAGATACAGCTCACAGCT GCTCTTTTTCTTTCTCCTCTTGCTGCGTCTCCTGTTTCTGCTTCTGCTAA TTTATTAATCAAATTTCT back to topmRNA from alignment at Chromosome01:1135435..1139652- Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >Manes.01G006300.1.v6.1 ID=Manes.01G006300.1.v6.1|Name=Manes.01G006300.1|organism=Manihot esculenta|type=mRNA|length=4218bp|location=Sequence derived from alignment at Chromosome01:1135435..1139652- (Manihot esculenta) AGAAATTTGATTAATAAATTAGCAGAAGCAGAAACAGGAGACGCAGCAAG
AGGAGAAAGAAAAAGAGCAGCTGTGAGCTGTATCTTCGGCGTTATTTGCT
GTCACCCACTTCTCCATCATCACCTCCTACCCTTGCATTTCATCCTTAAA
GCTTTCAACTTTCTTTTACAAGAAAAGAAAGACGAGTTGCAGAGGGCAGA
TCTCTCCTTTTCATATGTATATGAAATAAGCAAAGATGGCACTGAATCGG
TTTTCTTTATTTCTCTTCTTTCTTCTGTTGATTGTTGCCTTTGCTCCTCC
TTCTGCTTCCAGTTCTATTTCAGGTATTTTAAGGAATTTATCATGTACGC
ACATACTAGACTTTGATTTTTTGTTTTCTAGAACTTGATTTTGTGCTGTT
GCTGATTCGGATCCAGATTCTGTTTTTCAATCCCATGATTCCACAGGCAG
GAATCTGCTTCAGGCTAAGAAAGGTTTCTTTTCTTTTCTTTTCTTTCTTC
TTATTCACATTTCTCTAATTATTATTTTTTGGATTGGGTTTAATCTTGGA
TTTCCTTTGTGGGTTTTGTTATAATACTGTTCTTATGTGATCTAAGTGCT
TTGAGTTGTTTAATTATGCATCATTTTTCAGCCTAGAAATCAAGAAATTA
TGTTCTGAAATGAGAATTATGTTTTGTGAATTTCTATAACTTGGTTGATT
TTTGTGCTCAATAATTTGTTTAAGGCTGAATTTGTTTGTTCAAGCCTCCA
AAGTTACCCTGTTGCTTTAACAGTGAGATCATTGCTTCTTTTTTTTTTTC
TGTTGTTTATCTCTGTTCTAGCATAAATTTAATTGATTGCCTTCTAATTA
TAAGTTACCAACCCTACAAATAGGGATTTCTGATCAGTTACTAGCTGATA
GAGCAGTTATTTTCCTTTAAAATTCATAGCGGCTTTACTCAAGATGTTGA
TTCATTGGAAAAATGAAAAAGAAGTTAGCCTGAGGAGGAAGGCAATTACT
TAATTAATATAAAATGCCATCTGATTTCATGCAATTTTGCTTTTATCAGC
CGATTTGAATTTACTAATATAATTTGTTGTCAAGTGATATTTCATTTGAA
CATTGCTCATCAAGTCAGCTATATGAGGTTGTGGGTTCATTGTTTCTCTT
GTGCATTTATATATTGCACCATAGTGTTTGAAATTTGGTAACGTGCTTGC
ATAAGTTATTGATGCAGTCAAGACAATTAAATTTAGCAAGTTTTGGGTTT
ACTCTGTCTGCAATCCAATCTTTTTTCTAAGTTTTTATGTAGGAAGTATT
GGTTTTACTATTATTTAGGAACTTAGCATTAGGAATATTTAGAAAATTGT
TTGCTTCCTATCATATTTTGTATTGGTTTGGTATGATAAAATATTAAATC
TCAACAAAATCTATGTAACTTAGTTATTTTCTTATGTTTTGATGTGTTAA
ACATTTGATTTCAAATGTTTGATTCCTACTACTACTGCTCTGCTCTCTCT
CTCTCTCTCTCTCCTCCCCCTGCCCCTTTCATTCTAGTACTTCTGTCCTT
CCATTCTTCAGGCTTCTGCCACCTTTTCCTCTGCTGCTAAATTAGGTCAG
ATAATGTTCACAGCCCCAACAATCTCTAATTTCTATTTATTTATCTCTAA
CAAACTGTAGTTCAATTTCCTAATACTAAATTCCCCTTTCTCATTAAATC
AAAAGTTCTAAAACCCTACCAGTTGTTTGAGAATTGTTCACCATCGAAGC
ATTGCTGAGCCGGTTCCACAACCTGTCCTATATATGTTAGGATGAATTTT
CCACTAGTATGACTGTATGACTTGAAAACCAGAATTTGCATTTGCATGTG
CATGTCATTCTAAAGTTACATTGTGAATTCACAAGACTTTATAGAAACAG
TTCATTATTCATCAAATAAAGCCATTTGCATGTTGATATTTGGAAGTACA
ATTTGGACTTCTCTAAAGTCCTTAATCTCCATGCTTTGGCAATTGTTTTT
TTTTTTCCCATCAAGTACACTTAGGTCGATATGTATCCTGTGTTAATGAA
GTCAAAATATAATGTAGGACGAAGCAAATATTGGCTTCTATTTAGACTAT
GTTTGGTTGGAGGGGAAAGAGGGTAAATAAAGGTAATGAGAGGTAAGTAA
TATATGTACCCCCTATCTGGAAAGAGGTGAAGGAGGTGTAAACAAAGACA
AGAAATAGTAAGCTTTACCTTGCTTTACACCTCAAATGCCAATTTTTCTT
ACACATCAAATTGGAGTTTGAGGAGAAGGAAATAGGACAATTATTTAAAT
TTTAATATTTATTACCCTCTCTTATCTTCCTATTAATTTATCCCTTTCGA
AACATGTAATTTATTATTATTATTATTGCAACCTTCCTTACCCTTCCTCC
TCTGTACCTTCCTTTATCCCTCTATTAAATTCCCTCACCTTGTCCAAAGG
CTTTTTTTGGAAGAAGAGGAAAATGAGGGGAAATGACATATGAAGAAAAT
AGAACATGAAATGCTTACATTTCTTTTCCTTTGTAATGTGGGTCCCTTTT
TCTTTCTTCCTTCCATTTCCTTTCATTTTCACTCTATTATACATTTTCCT
CCCTCTCCCAAAGATAACCTAAACGATTTGTGAGACTTGTAGGCTTTTAG
AGAGTAGTGCATTACGTTCATGGTTCAAAATTATGTGGTAGATTGAAATT
TTAATTTTGGAGATTTGTAGTGTAAAAAATGGATGAATTCAAAATGTTCA
ACTGAGGAAATCTAATTCAAAGGATGACAAATGGCAAAAGGGCCTAAATT
GCCCCTGAACTGTACAGCAAGTGTCAAATGCCAAATTTTTTTTTTTTGGT
CCAAATTTGTCCCTTAACTATCATCCATCACTTGTAAGGATTTAAAGAGA
ATGAGCTACACTCTTTACAGTCTATTTGGCTTATTCTCTGTAAATCCTTA
TAAGTGATGGCATTATTTCTACTTATTATGATAGTTTAAAGGCAAATTTG
GGCTAAAAAAATGAAATTTAACATTTTTGGCCCCTGCAGTATGGTTCAGG
GCTAAATTTGGCATTTTAGCTGATAACAAATTCTTTGCTATAGCCTTTGT
GACGATAATTTCCAATGTTTTCCCAATCTTCTTGTTTTAGTGATTATTAA
ATTTTCTGAATTGATTAATTCCTAGTTTCATGCATACATCTACATTGATG
ATACAATGTTAATGAAATTATTTTATATATGCTCTTGGACATGTTGATTA
TACTTCCTTTCCATTCAGGCCCGTAGTCTGGTCTTGGCTTTGTAACCTGT
CACAATGATTGCTCGGTTATCTACATATGCAAGTGATGGTTGTGTTTATC
TTTGATGATCTTTGATCTGCATATGTACATTTTTTTATTGATTTGTCCGT
TTTCGATAAAAAGATGGGTGCTGTAATCCATTTTTTTTTTGTGTTCAAAA
TATTCAAAAAAATCAAAGATATCATAGAAACCACTGCCAAATACCCCTAG
CAATTCTGTTCCACAATTAATTATGCTTTAGCATTATATTATAGAATCAC
ATTCTGATAATCTAATGTTATGTTACCTTCTCTGCAGCCTGCCCATTAAA
CTTCGAGTTTCTGAACTATACAGTCCTCACGAGCCAATGTAAAGGACCTA
AGTATCCTCGTGATCCATGTTGTAAAGCATTCAAGGACTTTGCTTGTCCT
TATGCTGATTATTTGAATGATTTGACCAATGATTGTGCGTCAACCATGTT
CAGCTACATTAACCTAAACGGAAAATACCCACCTGGCCTTTTCGCTAGTG
AATGCCGAGAAGGGAAACTGGGGCTCGCATGCCCTGCACTGGCGCCTTCA
CAGTTGGCTAATGATAGTGGGAGTCAGATTATTCGCTATCCATCCCTGCT
GCTGATGCTCACATCTAGCTTCCTAGTGTTGTTAGTTCACTTGTTTTGAA
GGCTTGAAATGTTGATTATATATTTATTCTCCAATAATTGAATTATATTC
TTAACCATTATTACCTTCTTTGTTATTTCATTGTATTTGTGCTAGAGTTA
AATTCATCCGTCAGGCATTGTGAAAATTTAATTTGTATATTGGTTTGTGA
TTTGCTGCCCAAGTGGTAGGTTTTAGTGCTTGGTTGTATTGAGTGATTAA
TGATTCAACACTTAGAGCTATATGTACTTCAAAATTTAAATACAACGACT
CCTCCAGTTTCATTTCTT back to topCoding sequence (CDS) from alignment at Chromosome01:1135435..1139652- >Manes.01G006300.1.v6.1 ID=Manes.01G006300.1.v6.1|Name=Manes.01G006300.1|organism=Manihot esculenta|type=CDS|length=507bp|location=Sequence derived from alignment at Chromosome01:1135435..1139652- (Manihot esculenta) ATGGCACTGAATCGGTTTTCTTTATTTCTCTTCTTTCTTCTGTTGATTGT TGCCTTTGCTCCTCCTTCTGCTTCCAGTTCTATTTCAGATTCTGTTTTTC AATCCCATGATTCCACAGGCAGGAATCTGCTTCAGGCTAAGAAAGCCTGC CCATTAAACTTCGAGTTTCTGAACTATACAGTCCTCACGAGCCAATGTAA AGGACCTAAGTATCCTCGTGATCCATGTTGTAAAGCATTCAAGGACTTTG CTTGTCCTTATGCTGATTATTTGAATGATTTGACCAATGATTGTGCGTCA ACCATGTTCAGCTACATTAACCTAAACGGAAAATACCCACCTGGCCTTTT CGCTAGTGAATGCCGAGAAGGGAAACTGGGGCTCGCATGCCCTGCACTGG CGCCTTCACAGTTGGCTAATGATAGTGGGAGTCAGATTATTCGCTATCCA TCCCTGCTGCTGATGCTCACATCTAGCTTCCTAGTGTTGTTAGTTCACTT GTTTTGA back to top
|