Manes.01G004900.1.v6.1 (mRNA)

Overview
NameManes.01G004900.1
Unique NameManes.01G004900.1.v6.1
TypemRNA
OrganismManihot esculenta (Cassava)
Sequence length906
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chromosome01chromosomeChromosome01:867437..868342 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Manihot esculenta (JGI)2015-07-22
Properties
Property NameValue
Pacid32357328
Longest1
AncestorIdentifiercassava4.1_012722m.v4.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Manes.01G004900Manes.01G004900.v6.1Manihot esculentagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Manes.01G004900.1Manes.01G004900.1.v6.1-proteinManihot esculentapolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Manes.01G004900.1.v6.1.CDS.1Manes.01G004900.1.v6.1.CDS.1Manihot esculentaCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Manes.01G004900.1.v6.1 ID=Manes.01G004900.1.v6.1|Name=Manes.01G004900.1|organism=Manihot esculenta|type=mRNA|length=906bp
ATGACGCCTGAAAATCTCCTCCACTATCCATTCCCCTCCCAGAAATGCAC
CCTTGGTTGCCCCATCCTTGACCGCTGTCTTAATGGCGGCATCCCTTGCA
ATTCAATCACCGAAATTTTTGCCGAAAGCGGCTCCGGCAAGACACAGCTC
TGCCTACAACTTTCCCTCTGCGCTCAACTCCCAGTCTCCCTAGGCGGCCT
TTCTGCTTCCGCTCTCTACTTCCACACCGAATTCTCTTTTCCCTTTCGCC
GCCTCCACCAGCTCTCCCATTGTTTCCAATCTTTATACTCTCAAGCTGTT
ATTGATGAGGCAAATTGTAGTAGTAACTATAATAATTATAATCCGTGTGA
CAATATATATGTACAAAGCGTACACTCTGCAGATCAACTGCTCGATATAA
TGCCCAAGATAGAATCATTTCTGGTAAATTCTAAAACCCATTTCCCTGTT
AGGCTGATTGTGATTGATTCAGTTGCGGCGCTTTTTAGGTCTGAATTCGA
TAATACAAGCAGCGATCTAAGGAGGAGGTCCTTGCTCTTTTTCAAAATAT
CTGGGAAATTGAAGGAGCTGGCGAAGAGATTTAATTTGGCAGTGGTGGTG
ACTAACCAGGTGGTGGATTTTGTGGGATCGGGGGAGGGCGTAAACGGGGT
GAGGATTGGAAATTTGGCTAGCTTGTATTCTTCTGGGAGGAGGGTTTGTC
CGGCATTGGGGTTGGCCTGGGCCAGTTGTGTGAATTCAAGGCTTTTCTTG
GCGAGGGACGAGAATGGAATGGTGGATGGGGATGAAGGTAGTTCTCCGTG
TGGGCAAACAAAGAGGCGGCTTCACGTTGTCTTTGCGCCTCACTTGCCCT
ATTCTTCGTGTGAATTAGTCATCAAGAGAGAAGGGGTTTTTGGTGTTGAC
AGATAA
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mRNA from alignment at Chromosome01:867437..868342+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Manes.01G004900.1.v6.1 ID=Manes.01G004900.1.v6.1|Name=Manes.01G004900.1|organism=Manihot esculenta|type=mRNA|length=906bp|location=Sequence derived from alignment at Chromosome01:867437..868342+ (Manihot esculenta)
ATGACGCCTGAAAATCTCCTCCACTATCCATTCCCCTCCCAGAAATGCAC CCTTGGTTGCCCCATCCTTGACCGCTGTCTTAATGGCGGCATCCCTTGCA ATTCAATCACCGAAATTTTTGCCGAAAGCGGCTCCGGCAAGACACAGCTC TGCCTACAACTTTCCCTCTGCGCTCAACTCCCAGTCTCCCTAGGCGGCCT TTCTGCTTCCGCTCTCTACTTCCACACCGAATTCTCTTTTCCCTTTCGCC GCCTCCACCAGCTCTCCCATTGTTTCCAATCTTTATACTCTCAAGCTGTT ATTGATGAGGCAAATTGTAGTAGTAACTATAATAATTATAATCCGTGTGA CAATATATATGTACAAAGCGTACACTCTGCAGATCAACTGCTCGATATAA TGCCCAAGATAGAATCATTTCTGGTAAATTCTAAAACCCATTTCCCTGTT AGGCTGATTGTGATTGATTCAGTTGCGGCGCTTTTTAGGTCTGAATTCGA TAATACAAGCAGCGATCTAAGGAGGAGGTCCTTGCTCTTTTTCAAAATAT CTGGGAAATTGAAGGAGCTGGCGAAGAGATTTAATTTGGCAGTGGTGGTG ACTAACCAGGTGGTGGATTTTGTGGGATCGGGGGAGGGCGTAAACGGGGT GAGGATTGGAAATTTGGCTAGCTTGTATTCTTCTGGGAGGAGGGTTTGTC CGGCATTGGGGTTGGCCTGGGCCAGTTGTGTGAATTCAAGGCTTTTCTTG GCGAGGGACGAGAATGGAATGGTGGATGGGGATGAAGGTAGTTCTCCGTG TGGGCAAACAAAGAGGCGGCTTCACGTTGTCTTTGCGCCTCACTTGCCCT ATTCTTCGTGTGAATTAGTCATCAAGAGAGAAGGGGTTTTTGGTGTTGAC AGATAA
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Coding sequence (CDS) from alignment at Chromosome01:867437..868342+

>Manes.01G004900.1.v6.1 ID=Manes.01G004900.1.v6.1|Name=Manes.01G004900.1|organism=Manihot esculenta|type=CDS|length=906bp|location=Sequence derived from alignment at Chromosome01:867437..868342+ (Manihot esculenta)
ATGACGCCTGAAAATCTCCTCCACTATCCATTCCCCTCCCAGAAATGCAC
CCTTGGTTGCCCCATCCTTGACCGCTGTCTTAATGGCGGCATCCCTTGCA
ATTCAATCACCGAAATTTTTGCCGAAAGCGGCTCCGGCAAGACACAGCTC
TGCCTACAACTTTCCCTCTGCGCTCAACTCCCAGTCTCCCTAGGCGGCCT
TTCTGCTTCCGCTCTCTACTTCCACACCGAATTCTCTTTTCCCTTTCGCC
GCCTCCACCAGCTCTCCCATTGTTTCCAATCTTTATACTCTCAAGCTGTT
ATTGATGAGGCAAATTGTAGTAGTAACTATAATAATTATAATCCGTGTGA
CAATATATATGTACAAAGCGTACACTCTGCAGATCAACTGCTCGATATAA
TGCCCAAGATAGAATCATTTCTGGTAAATTCTAAAACCCATTTCCCTGTT
AGGCTGATTGTGATTGATTCAGTTGCGGCGCTTTTTAGGTCTGAATTCGA
TAATACAAGCAGCGATCTAAGGAGGAGGTCCTTGCTCTTTTTCAAAATAT
CTGGGAAATTGAAGGAGCTGGCGAAGAGATTTAATTTGGCAGTGGTGGTG
ACTAACCAGGTGGTGGATTTTGTGGGATCGGGGGAGGGCGTAAACGGGGT
GAGGATTGGAAATTTGGCTAGCTTGTATTCTTCTGGGAGGAGGGTTTGTC
CGGCATTGGGGTTGGCCTGGGCCAGTTGTGTGAATTCAAGGCTTTTCTTG
GCGAGGGACGAGAATGGAATGGTGGATGGGGATGAAGGTAGTTCTCCGTG
TGGGCAAACAAAGAGGCGGCTTCACGTTGTCTTTGCGCCTCACTTGCCCT
ATTCTTCGTGTGAATTAGTCATCAAGAGAGAAGGGGTTTTTGGTGTTGAC
AGATAA
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