Manes.01G004400.1.v6.1 (mRNA)

Overview
NameManes.01G004400.1
Unique NameManes.01G004400.1.v6.1
TypemRNA
OrganismManihot esculenta (Cassava)
Sequence length927
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chromosome01chromosomeChromosome01:815791..816717 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Manihot esculenta (JGI)2015-07-22
Properties
Property NameValue
Pacid32359245
Longest1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Manes.01G004400Manes.01G004400.v6.1Manihot esculentagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Manes.01G004400.1Manes.01G004400.1.v6.1-proteinManihot esculentapolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Manes.01G004400.1.v6.1.CDS.1Manes.01G004400.1.v6.1.CDS.1Manihot esculentaCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Manes.01G004400.1.v6.1 ID=Manes.01G004400.1.v6.1|Name=Manes.01G004400.1|organism=Manihot esculenta|type=mRNA|length=927bp
ATGCATAATCATCTATCGGGAGCCGAACCATTTCCGGTTCCAAGACCGTC
GCCGCTGTCATCCGAGAAAGAAACTGAGGATCAATCAACAAACAAAGCTC
CTCAAAGTTGTGTCATCCTTACCTATGACGCCAACGTAGCAGAATCCTCT
CGCCTCGTAACAGTGACATGGAACAAAAACCTTATGAACTATTCTCTTAC
AATTAGCGTTGAAAACTTTTCAAATGAAAATCCTTACATTTGCAAGATTG
ATTTAAAGGGTTGGCAGTTTTGGGGAAGAAAAGGTATAAAATCCTTCCAA
GTTGATGGAAAACGAGTAGAAATTTACTGGGATTTTCGACATGCAAAATT
TACGAACAATCCTGAGCCTTCCTCGGATTATTATGTGGCTCTAGTTTATG
ATGAAGAGGTTGTCCTAATGCTCGGAGATTTAAAGAAAGATGCTTACAAA
AGAACTAAAAAAAGACCATCGTTGATAGAACCAATATTGTTGTGCAAGAA
AGAAAATGTTTATGGCAAGAAAATATTTTGCAGCAAAGCAATGCTACACA
ATGAGAAGAAAGAACACGACATTGTCATAGAAATGTCATCAGGGATTGGT
GATCCTGAGCTGTGGATCAGCATTGACAGCTTTGAGGTAATTCATGTAAT
GAATTTGAATTGGAGATTTAGAGGGAATGAGAAAGTGACTATGGTGGACG
ATGTGGTGGTAGAGATTTTCTGGGACGTCCATGATTGGTTGTTTAATAGC
TCAGCATCAGCAGCCATGCAGGGCAATGGGTTGTTCATTTTCAAGCCTGG
ATTGGCAGGTTCTGACTCTAAGATTAATCAAAAAGGAGATGATGGTATTG
GTGTGAGGTATGATTCGCCAGCAGAGAGGAGTGCTTCAGAGTTTTTTCAT
GTGATTTACGCTTGGAGAATTGATTAA
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mRNA from alignment at Chromosome01:815791..816717+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Manes.01G004400.1.v6.1 ID=Manes.01G004400.1.v6.1|Name=Manes.01G004400.1|organism=Manihot esculenta|type=mRNA|length=927bp|location=Sequence derived from alignment at Chromosome01:815791..816717+ (Manihot esculenta)
ATGCATAATCATCTATCGGGAGCCGAACCATTTCCGGTTCCAAGACCGTC GCCGCTGTCATCCGAGAAAGAAACTGAGGATCAATCAACAAACAAAGCTC CTCAAAGTTGTGTCATCCTTACCTATGACGCCAACGTAGCAGAATCCTCT CGCCTCGTAACAGTGACATGGAACAAAAACCTTATGAACTATTCTCTTAC AATTAGCGTTGAAAACTTTTCAAATGAAAATCCTTACATTTGCAAGATTG ATTTAAAGGGTTGGCAGTTTTGGGGAAGAAAAGGTATAAAATCCTTCCAA GTTGATGGAAAACGAGTAGAAATTTACTGGGATTTTCGACATGCAAAATT TACGAACAATCCTGAGCCTTCCTCGGATTATTATGTGGCTCTAGTTTATG ATGAAGAGGTTGTCCTAATGCTCGGAGATTTAAAGAAAGATGCTTACAAA AGAACTAAAAAAAGACCATCGTTGATAGAACCAATATTGTTGTGCAAGAA AGAAAATGTTTATGGCAAGAAAATATTTTGCAGCAAAGCAATGCTACACA ATGAGAAGAAAGAACACGACATTGTCATAGAAATGTCATCAGGGATTGGT GATCCTGAGCTGTGGATCAGCATTGACAGCTTTGAGGTAATTCATGTAAT GAATTTGAATTGGAGATTTAGAGGGAATGAGAAAGTGACTATGGTGGACG ATGTGGTGGTAGAGATTTTCTGGGACGTCCATGATTGGTTGTTTAATAGC TCAGCATCAGCAGCCATGCAGGGCAATGGGTTGTTCATTTTCAAGCCTGG ATTGGCAGGTTCTGACTCTAAGATTAATCAAAAAGGAGATGATGGTATTG GTGTGAGGTATGATTCGCCAGCAGAGAGGAGTGCTTCAGAGTTTTTTCAT GTGATTTACGCTTGGAGAATTGATTAA
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Coding sequence (CDS) from alignment at Chromosome01:815791..816717+

>Manes.01G004400.1.v6.1 ID=Manes.01G004400.1.v6.1|Name=Manes.01G004400.1|organism=Manihot esculenta|type=CDS|length=927bp|location=Sequence derived from alignment at Chromosome01:815791..816717+ (Manihot esculenta)
ATGCATAATCATCTATCGGGAGCCGAACCATTTCCGGTTCCAAGACCGTC
GCCGCTGTCATCCGAGAAAGAAACTGAGGATCAATCAACAAACAAAGCTC
CTCAAAGTTGTGTCATCCTTACCTATGACGCCAACGTAGCAGAATCCTCT
CGCCTCGTAACAGTGACATGGAACAAAAACCTTATGAACTATTCTCTTAC
AATTAGCGTTGAAAACTTTTCAAATGAAAATCCTTACATTTGCAAGATTG
ATTTAAAGGGTTGGCAGTTTTGGGGAAGAAAAGGTATAAAATCCTTCCAA
GTTGATGGAAAACGAGTAGAAATTTACTGGGATTTTCGACATGCAAAATT
TACGAACAATCCTGAGCCTTCCTCGGATTATTATGTGGCTCTAGTTTATG
ATGAAGAGGTTGTCCTAATGCTCGGAGATTTAAAGAAAGATGCTTACAAA
AGAACTAAAAAAAGACCATCGTTGATAGAACCAATATTGTTGTGCAAGAA
AGAAAATGTTTATGGCAAGAAAATATTTTGCAGCAAAGCAATGCTACACA
ATGAGAAGAAAGAACACGACATTGTCATAGAAATGTCATCAGGGATTGGT
GATCCTGAGCTGTGGATCAGCATTGACAGCTTTGAGGTAATTCATGTAAT
GAATTTGAATTGGAGATTTAGAGGGAATGAGAAAGTGACTATGGTGGACG
ATGTGGTGGTAGAGATTTTCTGGGACGTCCATGATTGGTTGTTTAATAGC
TCAGCATCAGCAGCCATGCAGGGCAATGGGTTGTTCATTTTCAAGCCTGG
ATTGGCAGGTTCTGACTCTAAGATTAATCAAAAAGGAGATGATGGTATTG
GTGTGAGGTATGATTCGCCAGCAGAGAGGAGTGCTTCAGAGTTTTTTCAT
GTGATTTACGCTTGGAGAATTGATTAA
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