Manes.01G004200.1.v6.1 (mRNA)

Overview
NameManes.01G004200.1
Unique NameManes.01G004200.1.v6.1
TypemRNA
OrganismManihot esculenta (Cassava)
Sequence length663
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chromosome01chromosomeChromosome01:806179..806841 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Manihot esculenta (JGI)2015-07-22
Properties
Property NameValue
Pacid32359727
Longest1
AncestorIdentifiercassava4.1_020996m.v4.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Manes.01G004200Manes.01G004200.v6.1Manihot esculentagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Manes.01G004200.1Manes.01G004200.1.v6.1-proteinManihot esculentapolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Manes.01G004200.1.v6.1.CDS.1Manes.01G004200.1.v6.1.CDS.1Manihot esculentaCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Manes.01G004200.1.v6.1 ID=Manes.01G004200.1.v6.1|Name=Manes.01G004200.1|organism=Manihot esculenta|type=mRNA|length=663bp
TCAGGTCTCAGTGGGCATCTCGAAACGACAGACAGGACAATAGTGGCTAT
TCTCTAGCCACTTGAGAATGCAGGTTCCATGAAAATGATGACCACAAGGC
ATGCTCGCTCCAAATTCAACAATCTCATCCATGCATATGCTGCAATTTTC
ATTCTCACCAACTTTCACACACTTCAGTATCCTTGACTTGCGAGCCGTTG
GAACCATCCCATTGTTTCCTTCCATCATTCTTCTCTCATCCAACAGCGTA
ATCTTTTTGCTCGCTATCTTGAACTCCAGTGCCAAAACCTTGCGTTTCTT
GGATATTCGGCAGCTAATCTGGTTAACTTTCTCCATTATATCTAAAACCA
GTCTAACATGACAACGCGAGTCGACTCCAAGATGATCCAAAGTTGGCGAA
ATAGCCTTGAACAAGGCACGCTTGTTCTTGTTCTTGAAGAGGCTAAAATC
AAACCAGAAACCAACAGAGGCTGGCTGCTCACGTAACCTGCGAAGAGTCG
TTGGTGTGCCATCGGGTGAGAGGCAAATCCATCGGCGGTGGACATGGTAG
GAGAGGTTGATGTAGACTTGAAATGATGATGCTCGGCGCAGGCGAAGGAG
GTCTGTTTCTGATAGCTCCGATTGTGGGATTAGTCGGAGTGTTGAAAGGT
GAATACGCTCCAT
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mRNA from alignment at Chromosome01:806179..806841-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Manes.01G004200.1.v6.1 ID=Manes.01G004200.1.v6.1|Name=Manes.01G004200.1|organism=Manihot esculenta|type=mRNA|length=663bp|location=Sequence derived from alignment at Chromosome01:806179..806841- (Manihot esculenta)
ATGGAGCGTATTCACCTTTCAACACTCCGACTAATCCCACAATCGGAGCT ATCAGAAACAGACCTCCTTCGCCTGCGCCGAGCATCATCATTTCAAGTCT ACATCAACCTCTCCTACCATGTCCACCGCCGATGGATTTGCCTCTCACCC GATGGCACACCAACGACTCTTCGCAGGTTACGTGAGCAGCCAGCCTCTGT TGGTTTCTGGTTTGATTTTAGCCTCTTCAAGAACAAGAACAAGCGTGCCT TGTTCAAGGCTATTTCGCCAACTTTGGATCATCTTGGAGTCGACTCGCGT TGTCATGTTAGACTGGTTTTAGATATAATGGAGAAAGTTAACCAGATTAG CTGCCGAATATCCAAGAAACGCAAGGTTTTGGCACTGGAGTTCAAGATAG CGAGCAAAAAGATTACGCTGTTGGATGAGAGAAGAATGATGGAAGGAAAC AATGGGATGGTTCCAACGGCTCGCAAGTCAAGGATACTGAAGTGTGTGAA AGTTGGTGAGAATGAAAATTGCAGCATATGCATGGATGAGATTGTTGAAT TTGGAGCGAGCATGCCTTGTGGTCATCATTTTCATGGAACCTGCATTCTC AAGTGGCTAGAGAATAGCCACTATTGTCCTGTCTGTCGTTTCGAGATGCC CACTGAGACCTGA
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Coding sequence (CDS) from alignment at Chromosome01:806179..806841-

>Manes.01G004200.1.v6.1 ID=Manes.01G004200.1.v6.1|Name=Manes.01G004200.1|organism=Manihot esculenta|type=CDS|length=663bp|location=Sequence derived from alignment at Chromosome01:806179..806841- (Manihot esculenta)
ATGGAGCGTATTCACCTTTCAACACTCCGACTAATCCCACAATCGGAGCT
ATCAGAAACAGACCTCCTTCGCCTGCGCCGAGCATCATCATTTCAAGTCT
ACATCAACCTCTCCTACCATGTCCACCGCCGATGGATTTGCCTCTCACCC
GATGGCACACCAACGACTCTTCGCAGGTTACGTGAGCAGCCAGCCTCTGT
TGGTTTCTGGTTTGATTTTAGCCTCTTCAAGAACAAGAACAAGCGTGCCT
TGTTCAAGGCTATTTCGCCAACTTTGGATCATCTTGGAGTCGACTCGCGT
TGTCATGTTAGACTGGTTTTAGATATAATGGAGAAAGTTAACCAGATTAG
CTGCCGAATATCCAAGAAACGCAAGGTTTTGGCACTGGAGTTCAAGATAG
CGAGCAAAAAGATTACGCTGTTGGATGAGAGAAGAATGATGGAAGGAAAC
AATGGGATGGTTCCAACGGCTCGCAAGTCAAGGATACTGAAGTGTGTGAA
AGTTGGTGAGAATGAAAATTGCAGCATATGCATGGATGAGATTGTTGAAT
TTGGAGCGAGCATGCCTTGTGGTCATCATTTTCATGGAACCTGCATTCTC
AAGTGGCTAGAGAATAGCCACTATTGTCCTGTCTGTCGTTTCGAGATGCC
CACTGAGACCTGA
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