Manes.01G003300.1.v6.1 (mRNA)

Overview
NameManes.01G003300.1
Unique NameManes.01G003300.1.v6.1
TypemRNA
OrganismManihot esculenta (Cassava)
Sequence length1566
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Chromosome01chromosomeChromosome01:660492..662057 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Manihot esculenta (JGI)2015-07-22
Properties
Property NameValue
Pacid32358463
Longest1
AncestorIdentifiercassava4.1_022618m.v4.1
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Manes.01G003300Manes.01G003300.v6.1Manihot esculentagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Manes.01G003300.1Manes.01G003300.1.v6.1-proteinManihot esculentapolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Manes.01G003300.1.v6.1.CDS.1Manes.01G003300.1.v6.1.CDS.1Manihot esculentaCDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>Manes.01G003300.1.v6.1 ID=Manes.01G003300.1.v6.1|Name=Manes.01G003300.1|organism=Manihot esculenta|type=mRNA|length=1566bp
TCAAGTTTCTCCAACATACCCAGAAAAAGTATATTTGTAATCATCCCCCT
CTGCAAAACCATTACTAGGATCCTTTCCCTCTCTTGTTACCTTCCTAACT
CTCTCTATTCTCTCAAGAATTCCCTTGACTGCTAAATCAAATGCATCTTC
AATGGTTTCCATTCTAGACCTGGGGTCTGCATATACAATCCTTGGAATGA
GTTTTATAACCTCCTCTCTCATAGCCAATACCCTATTTTCTGGTATTCTA
AGCAATGTCTGGTTTATGCCAGCTTTCCAATCTTTAACATCTCTCACAGG
CATATACACAGAATATTTACTATAATTCTTTGGTAAATGCCACTTATATT
GGGCATAGGCTGTACCTGGATGAAAGAAAACAGGAATGCACCCTGCTAAT
ATAGAATCAAATATGGATCTCCTTGTGTATGAATCCCCTGTAGGCTGCAA
GCAAAAAACTGAATTCTGAAACAGCCTCATCACATTCACTGGGTTATCAC
AACTAATTGCACCATTGACACCATAATCACACTCTAATAACTTGCACAAG
TTTTTTGAAGCTAGGCATTCTTCAATAATCTTGCCTCTGATAGAATCTTG
AAGATCAGGCCTTGGAGCACCAGCAAAAGAAAATAAGTATGGCCTTGTTT
GTCTTCTCACCTTATCTTGCCATTGAAACACTTCACTGTCTCTTGAGGGA
TGAAAACAAGTTGGATATGGTATAGCATAATCATTGTTCCATGAACTTGA
CTCTATTGCCAACATTGACATGTTATTAGATTCTGGCAAGAACCTAAACT
TGCTACCCCAATCAGACTCATTATCAGTTTGCCTTCTAAAATCCCAAGCA
ATTCTCCCTGCAACCAAGAAATGGTCTCTGCCCAACATTTTCTTCCACTC
AGGTTTTTCTACAAGCCACTTGACAAGATCAGAAGCAGATTGATCTCTCA
CTGATATTTTAAAACCCCAAAGATATCTGCTAACATCAAGACCAGCATAA
AATGGCACATAAATAGCAGAGGCAAGGAAAGAATCATTGGTTAAGCACTT
GTATTTCTTCATCCTAAAGTGGAAAATGACTTCCAACAAGAATTGATTAG
TAGAATACCAACTCTTGTTTAATAAAATTCCTTGCGAATTTTCTACTTCA
TGACCCAAAGCAGAGTTAACCAAATAAGAACACATGTTATGCTCAGCTCC
TGGGGTGATAGACTCACAATTTTCAAGCAAATCTCGGTTGAATCGGCTAG
GAAGATGATGAATATAAACGTATCGACCCAAACAAGAATCTTTAACAGGT
TTTGGTAGCACATTGTCCTCTCTAAGATAGTCAGCTTTAACGGGTCCAAT
GGAGGTTTGGTTGAGATTTTCAGGGAGGTGGAGGGATTTTGATTTGTGGG
TAGAGATTGAATTTTCATAATCAGTAATTAAAACAGTGACCCTTTCTTGG
GTTCCAATTAGAGCTGAATAATCAAAGCCAAACAAAACAAAACAGAAAAT
GAAGGAGACAAGAATGACCAACCATAGTTGAGTGTTGCAGCAATTTCTGG
TGATTGGATTCTCCAT
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mRNA from alignment at Chromosome01:660492..662057-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Manes.01G003300.1.v6.1 ID=Manes.01G003300.1.v6.1|Name=Manes.01G003300.1|organism=Manihot esculenta|type=mRNA|length=1566bp|location=Sequence derived from alignment at Chromosome01:660492..662057- (Manihot esculenta)
ATGGAGAATCCAATCACCAGAAATTGCTGCAACACTCAACTATGGTTGGT CATTCTTGTCTCCTTCATTTTCTGTTTTGTTTTGTTTGGCTTTGATTATT CAGCTCTAATTGGAACCCAAGAAAGGGTCACTGTTTTAATTACTGATTAT GAAAATTCAATCTCTACCCACAAATCAAAATCCCTCCACCTCCCTGAAAA TCTCAACCAAACCTCCATTGGACCCGTTAAAGCTGACTATCTTAGAGAGG ACAATGTGCTACCAAAACCTGTTAAAGATTCTTGTTTGGGTCGATACGTT TATATTCATCATCTTCCTAGCCGATTCAACCGAGATTTGCTTGAAAATTG TGAGTCTATCACCCCAGGAGCTGAGCATAACATGTGTTCTTATTTGGTTA ACTCTGCTTTGGGTCATGAAGTAGAAAATTCGCAAGGAATTTTATTAAAC AAGAGTTGGTATTCTACTAATCAATTCTTGTTGGAAGTCATTTTCCACTT TAGGATGAAGAAATACAAGTGCTTAACCAATGATTCTTTCCTTGCCTCTG CTATTTATGTGCCATTTTATGCTGGTCTTGATGTTAGCAGATATCTTTGG GGTTTTAAAATATCAGTGAGAGATCAATCTGCTTCTGATCTTGTCAAGTG GCTTGTAGAAAAACCTGAGTGGAAGAAAATGTTGGGCAGAGACCATTTCT TGGTTGCAGGGAGAATTGCTTGGGATTTTAGAAGGCAAACTGATAATGAG TCTGATTGGGGTAGCAAGTTTAGGTTCTTGCCAGAATCTAATAACATGTC AATGTTGGCAATAGAGTCAAGTTCATGGAACAATGATTATGCTATACCAT ATCCAACTTGTTTTCATCCCTCAAGAGACAGTGAAGTGTTTCAATGGCAA GATAAGGTGAGAAGACAAACAAGGCCATACTTATTTTCTTTTGCTGGTGC TCCAAGGCCTGATCTTCAAGATTCTATCAGAGGCAAGATTATTGAAGAAT GCCTAGCTTCAAAAAACTTGTGCAAGTTATTAGAGTGTGATTATGGTGTC AATGGTGCAATTAGTTGTGATAACCCAGTGAATGTGATGAGGCTGTTTCA GAATTCAGTTTTTTGCTTGCAGCCTACAGGGGATTCATACACAAGGAGAT CCATATTTGATTCTATATTAGCAGGGTGCATTCCTGTTTTCTTTCATCCA GGTACAGCCTATGCCCAATATAAGTGGCATTTACCAAAGAATTATAGTAA ATATTCTGTGTATATGCCTGTGAGAGATGTTAAAGATTGGAAAGCTGGCA TAAACCAGACATTGCTTAGAATACCAGAAAATAGGGTATTGGCTATGAGA GAGGAGGTTATAAAACTCATTCCAAGGATTGTATATGCAGACCCCAGGTC TAGAATGGAAACCATTGAAGATGCATTTGATTTAGCAGTCAAGGGAATTC TTGAGAGAATAGAGAGAGTTAGGAAGGTAACAAGAGAGGGAAAGGATCCT AGTAATGGTTTTGCAGAGGGGGATGATTACAAATATACTTTTTCTGGGTA TGTTGGAGAAACTTGA
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Coding sequence (CDS) from alignment at Chromosome01:660492..662057-

>Manes.01G003300.1.v6.1 ID=Manes.01G003300.1.v6.1|Name=Manes.01G003300.1|organism=Manihot esculenta|type=CDS|length=1566bp|location=Sequence derived from alignment at Chromosome01:660492..662057- (Manihot esculenta)
ATGGAGAATCCAATCACCAGAAATTGCTGCAACACTCAACTATGGTTGGT
CATTCTTGTCTCCTTCATTTTCTGTTTTGTTTTGTTTGGCTTTGATTATT
CAGCTCTAATTGGAACCCAAGAAAGGGTCACTGTTTTAATTACTGATTAT
GAAAATTCAATCTCTACCCACAAATCAAAATCCCTCCACCTCCCTGAAAA
TCTCAACCAAACCTCCATTGGACCCGTTAAAGCTGACTATCTTAGAGAGG
ACAATGTGCTACCAAAACCTGTTAAAGATTCTTGTTTGGGTCGATACGTT
TATATTCATCATCTTCCTAGCCGATTCAACCGAGATTTGCTTGAAAATTG
TGAGTCTATCACCCCAGGAGCTGAGCATAACATGTGTTCTTATTTGGTTA
ACTCTGCTTTGGGTCATGAAGTAGAAAATTCGCAAGGAATTTTATTAAAC
AAGAGTTGGTATTCTACTAATCAATTCTTGTTGGAAGTCATTTTCCACTT
TAGGATGAAGAAATACAAGTGCTTAACCAATGATTCTTTCCTTGCCTCTG
CTATTTATGTGCCATTTTATGCTGGTCTTGATGTTAGCAGATATCTTTGG
GGTTTTAAAATATCAGTGAGAGATCAATCTGCTTCTGATCTTGTCAAGTG
GCTTGTAGAAAAACCTGAGTGGAAGAAAATGTTGGGCAGAGACCATTTCT
TGGTTGCAGGGAGAATTGCTTGGGATTTTAGAAGGCAAACTGATAATGAG
TCTGATTGGGGTAGCAAGTTTAGGTTCTTGCCAGAATCTAATAACATGTC
AATGTTGGCAATAGAGTCAAGTTCATGGAACAATGATTATGCTATACCAT
ATCCAACTTGTTTTCATCCCTCAAGAGACAGTGAAGTGTTTCAATGGCAA
GATAAGGTGAGAAGACAAACAAGGCCATACTTATTTTCTTTTGCTGGTGC
TCCAAGGCCTGATCTTCAAGATTCTATCAGAGGCAAGATTATTGAAGAAT
GCCTAGCTTCAAAAAACTTGTGCAAGTTATTAGAGTGTGATTATGGTGTC
AATGGTGCAATTAGTTGTGATAACCCAGTGAATGTGATGAGGCTGTTTCA
GAATTCAGTTTTTTGCTTGCAGCCTACAGGGGATTCATACACAAGGAGAT
CCATATTTGATTCTATATTAGCAGGGTGCATTCCTGTTTTCTTTCATCCA
GGTACAGCCTATGCCCAATATAAGTGGCATTTACCAAAGAATTATAGTAA
ATATTCTGTGTATATGCCTGTGAGAGATGTTAAAGATTGGAAAGCTGGCA
TAAACCAGACATTGCTTAGAATACCAGAAAATAGGGTATTGGCTATGAGA
GAGGAGGTTATAAAACTCATTCCAAGGATTGTATATGCAGACCCCAGGTC
TAGAATGGAAACCATTGAAGATGCATTTGATTTAGCAGTCAAGGGAATTC
TTGAGAGAATAGAGAGAGTTAGGAAGGTAACAAGAGAGGGAAAGGATCCT
AGTAATGGTTTTGCAGAGGGGGATGATTACAAATATACTTTTTCTGGGTA
TGTTGGAGAAACTTGA
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