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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Chromosome01 | chromosome | Chromosome01:259425..262398 - |
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Pacid | 32359990 |
Longest | 1 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
Manes.01G001400.1.v6.1.CDS.4 | Manes.01G001400.1.v6.1.CDS.4 | Manihot esculenta | CDS |
Manes.01G001400.1.v6.1.CDS.3 | Manes.01G001400.1.v6.1.CDS.3 | Manihot esculenta | CDS |
Manes.01G001400.1.v6.1.CDS.2 | Manes.01G001400.1.v6.1.CDS.2 | Manihot esculenta | CDS |
Manes.01G001400.1.v6.1.CDS.1 | Manes.01G001400.1.v6.1.CDS.1 | Manihot esculenta | CDS |
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Manes.01G001400.1.v6.1 ID=Manes.01G001400.1.v6.1|Name=Manes.01G001400.1|organism=Manihot esculenta|type=mRNA|length=2974bp ACAAGAACAGTAATAAACACAAACCACGCCATATATAGAAATATCAGTAG CATTGCACACAAGAAGCAACAAAGAAAGCTAGCTAGCTAGCATTACAAAA CAAAACACAAAAGCCAAACAATCATCTCCCATAGATTGACTTGAGAGATG ATAAGCATTGATTGTTTTGCAGCATTATTTAACCACACTGTAGGTGTGGA CTTATAGTCCTGTCACCTTTATTTCCACGACATTTCATTCAAATAACATG TCCCACACCATTTGTCTTTCAAAAGAAACAATTCATACACGGTGATAATT GCACATTGATAGTATACAGACCCATTCATCTAGCGACGGAAGCTTCTGAC TTGGCGGGGTGGATCGGCTTCGTCGTCTCGGAGCTTCACAAGAGTGTAAG TACCTGCACCAGCAACAGCCCCAAGTGTGGGTGCCACCAAGTATATCCAC AAATCCCTGTAATTTCCTGCGGCTACCGCTGGCCCCAGAGTCCTCACAGG ATTCATTGAACCTCCGCTAGATGGCCTGCCACGAAGAAAGTTGAAAATTT GCAATTATTAAAATGCTTTTCTAATGGAATCTTCGTTGGTCGCACCTTTC GGGAGCCACAATCCCTCTGTCAAGACCGTCTTGTCACGTTTTCATATATA ACCAAACTAGCCATTTGTCACCACTGACTAGACTACTCAAACTATTTCCC TGACTTGTCTCAAACACATTATTATTCCTATATTTATCATATATTTTATG AATTACATTTATAAATAAATAAAAATAATTAAAACTAATTCAAGTTTTAA TTTTTCAAAATTATACTCTTGCCATTGGCAAGGAATAAATAAAGGAAATA GGCATGGATTATTACTCACCCAGCTACTAGAATGTTGAGCATAACAGTTG CTCCAACTGCTATTCCTGCCAACTCGCCTACCTGATAATAGAGTGAGAGA ATTTAGATCAAAAAACAAATAAAAATGGAGAAAATATATATTTTAGAGGA AAGAAATGGAGGCTAAAATTAGAAAGGAAATGAAAGAAAACTTACAGCTC GGGTATCAGTTGCAACAGCGGTGACGACAAACAAGAGATTGAAAGTAATG AGAAACTCAAGTGCAAAAGCCTGTCCAACGCCAACGGAAGGAACAGTTAC GCCACCAGACATGAAAGGATGGAAGACACCTTTAAGAGCAAAAGAAGCAC AAATGGAGGCAGAAACTTGGGCAGCTATATAGGCAGGGACTTGCATCCAA GGAAAGTGACGGAGAGATGCAAAGGCGATGGTCAAGGATGGATTCAAGTG AGCTCCTGATATGTGTCCAGTTGATAAAATTATTATCATCACGGCTAGCC CAGCACATGCTGCATTCCCAATCAATGACTCTGCTCCGTTATACTTTTGG TTCACTATCGGTCCTGCTGTTGCTGCAAATATCAGGATGAAGGTTCCCAC GAATTCTGCTCCAAGCTTCAATACAATTCCATTTTCCCATATTATTAGAT TTTTTAAAATTATAGAAATTAAATAATAAAATAATTAATGAAAAGATTAA TTAATAATTTTTTTAAAATTATAAAATTAATTATTAAATTTTTCGTATTA TAAAAATTAAATAATATTTTTTTAAAAAAAAATATTGAACCCATCCAAAA ATATATCAATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA TATATATATATATATATATATATATATTTAAAGTCAACCTTAAGGAGTGT TTCTCCGACTTTGTCAAAATAAATAAAAAGTGTTGTGTCCAAGTGACATG AATTTACTATCATCACTGAGTAAAGCTAAATCAGTGAGCGCTTATGAGTT AAAACTGCAATATTTTATTAATTTAATTTAAATTTAAATATGTGATTTAT TATAATTTATTTATTTATTCAGAAAATGTACAAAAATTTCCCCATTGGTT ACTCTAGTTATGTATATAAAGGCTGCGGAATTTAAAAAATAAAAAAATAA AACAATATTCTAATGTGAAAAAATTAACAAAGTGAGAGAGAAGGAAGAGA AGAGATACCTTGCGGGTAAGAGAGACATCCGGTGAAGGGAAATCAGTGAA GCACGTGTGGGGTTGACCCCAAGTTGGAGCATTAACTGGCAAGCACTTGC ATCTCGGCATTGACTTTCGATCATAGGATAGTGAATCTATCCTCAGTGAA GGAAACAGCGGCCCTCCCGGCGTCCCTGGCGTCGCCGGCGCCGAAGCTGT TGGTGTCCCTGTCTCGTTTTCCGGCATTTGCTCTCTCTCTCTCTCTCTCT CTTTTTTCTATACTTTAATATCTAATTCAAGCAAAAAAATTTTTTTTTTT GAAATTTTAGATGATAGCTGGGAATGGGACGATGTTACATGATTTGACGT TTTTTTAACGGTTTACCTACACGGTGATCTTGTTCTTATCCAGACCGCTA ACGGTTAGGATTTACTAGAAATTT back to topmRNA from alignment at Chromosome01:259425..262398- Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >Manes.01G001400.1.v6.1 ID=Manes.01G001400.1.v6.1|Name=Manes.01G001400.1|organism=Manihot esculenta|type=mRNA|length=2974bp|location=Sequence derived from alignment at Chromosome01:259425..262398- (Manihot esculenta) AAATTTCTAGTAAATCCTAACCGTTAGCGGTCTGGATAAGAACAAGATCA
CCGTGTAGGTAAACCGTTAAAAAAACGTCAAATCATGTAACATCGTCCCA
TTCCCAGCTATCATCTAAAATTTCAAAAAAAAAAATTTTTTTGCTTGAAT
TAGATATTAAAGTATAGAAAAAAGAGAGAGAGAGAGAGAGAGAGCAAATG
CCGGAAAACGAGACAGGGACACCAACAGCTTCGGCGCCGGCGACGCCAGG
GACGCCGGGAGGGCCGCTGTTTCCTTCACTGAGGATAGATTCACTATCCT
ATGATCGAAAGTCAATGCCGAGATGCAAGTGCTTGCCAGTTAATGCTCCA
ACTTGGGGTCAACCCCACACGTGCTTCACTGATTTCCCTTCACCGGATGT
CTCTCTTACCCGCAAGGTATCTCTTCTCTTCCTTCTCTCTCACTTTGTTA
ATTTTTTCACATTAGAATATTGTTTTATTTTTTTATTTTTTAAATTCCGC
AGCCTTTATATACATAACTAGAGTAACCAATGGGGAAATTTTTGTACATT
TTCTGAATAAATAAATAAATTATAATAAATCACATATTTAAATTTAAATT
AAATTAATAAAATATTGCAGTTTTAACTCATAAGCGCTCACTGATTTAGC
TTTACTCAGTGATGATAGTAAATTCATGTCACTTGGACACAACACTTTTT
ATTTATTTTGACAAAGTCGGAGAAACACTCCTTAAGGTTGACTTTAAATA
TATATATATATATATATATATATATNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNTGATTGATATATTTTTGGATGGGTTCAATATTTTTTTT
TAAAAAAATATTATTTAATTTTTATAATACGAAAAATTTAATAATTAATT
TTATAATTTTAAAAAAATTATTAATTAATCTTTTCATTAATTATTTTATT
ATTTAATTTCTATAATTTTAAAAAATCTAATAATATGGGAAAATGGAATT
GTATTGAAGCTTGGAGCAGAATTCGTGGGAACCTTCATCCTGATATTTGC
AGCAACAGCAGGACCGATAGTGAACCAAAAGTATAACGGAGCAGAGTCAT
TGATTGGGAATGCAGCATGTGCTGGGCTAGCCGTGATGATAATAATTTTA
TCAACTGGACACATATCAGGAGCTCACTTGAATCCATCCTTGACCATCGC
CTTTGCATCTCTCCGTCACTTTCCTTGGATGCAAGTCCCTGCCTATATAG
CTGCCCAAGTTTCTGCCTCCATTTGTGCTTCTTTTGCTCTTAAAGGTGTC
TTCCATCCTTTCATGTCTGGTGGCGTAACTGTTCCTTCCGTTGGCGTTGG
ACAGGCTTTTGCACTTGAGTTTCTCATTACTTTCAATCTCTTGTTTGTCG
TCACCGCTGTTGCAACTGATACCCGAGCTGTAAGTTTTCTTTCATTTCCT
TTCTAATTTTAGCCTCCATTTCTTTCCTCTAAAATATATATTTTCTCCAT
TTTTATTTGTTTTTTGATCTAAATTCTCTCACTCTATTATCAGGTAGGCG
AGTTGGCAGGAATAGCAGTTGGAGCAACTGTTATGCTCAACATTCTAGTA
GCTGGGTGAGTAATAATCCATGCCTATTTCCTTTATTTATTCCTTGCCAA
TGGCAAGAGTATAATTTTGAAAAATTAAAACTTGAATTAGTTTTAATTAT
TTTTATTTATTTATAAATGTAATTCATAAAATATATGATAAATATAGGAA
TAATAATGTGTTTGAGACAAGTCAGGGAAATAGTTTGAGTAGTCTAGTCA
GTGGTGACAAATGGCTAGTTTGGTTATATATGAAAACGTGACAAGACGGT
CTTGACAGAGGGATTGTGGCTCCCGAAAGGTGCGACCAACGAAGATTCCA
TTAGAAAAGCATTTTAATAATTGCAAATTTTCAACTTTCTTCGTGGCAGG
CCATCTAGCGGAGGTTCAATGAATCCTGTGAGGACTCTGGGGCCAGCGGT
AGCCGCAGGAAATTACAGGGATTTGTGGATATACTTGGTGGCACCCACAC
TTGGGGCTGTTGCTGGTGCAGGTACTTACACTCTTGTGAAGCTCCGAGAC
GACGAAGCCGATCCACCCCGCCAAGTCAGAAGCTTCCGTCGCTAGATGAA
TGGGTCTGTATACTATCAATGTGCAATTATCACCGTGTATGAATTGTTTC
TTTTGAAAGACAAATGGTGTGGGACATGTTATTTGAATGAAATGTCGTGG
AAATAAAGGTGACAGGACTATAAGTCCACACCTACAGTGTGGTTAAATAA
TGCTGCAAAACAATCAATGCTTATCATCTCTCAAGTCAATCTATGGGAGA
TGATTGTTTGGCTTTTGTGTTTTGTTTTGTAATGCTAGCTAGCTAGCTTT
CTTTGTTGCTTCTTGTGTGCAATGCTACTGATATTTCTATATATGGCGTG
GTTTGTGTTTATTACTGTTCTTGT back to topCoding sequence (CDS) from alignment at Chromosome01:259425..262398- >Manes.01G001400.1.v6.1 ID=Manes.01G001400.1.v6.1|Name=Manes.01G001400.1|organism=Manihot esculenta|type=CDS|length=897bp|location=Sequence derived from alignment at Chromosome01:259425..262398- (Manihot esculenta) ATGCCGGAAAACGAGACAGGGACACCAACAGCTTCGGCGCCGGCGACGCC AGGGACGCCGGGAGGGCCGCTGTTTCCTTCACTGAGGATAGATTCACTAT CCTATGATCGAAAGTCAATGCCGAGATGCAAGTGCTTGCCAGTTAATGCT CCAACTTGGGGTCAACCCCACACGTGCTTCACTGATTTCCCTTCACCGGA TGTCTCTCTTACCCGCAAGCTTGGAGCAGAATTCGTGGGAACCTTCATCC TGATATTTGCAGCAACAGCAGGACCGATAGTGAACCAAAAGTATAACGGA GCAGAGTCATTGATTGGGAATGCAGCATGTGCTGGGCTAGCCGTGATGAT AATAATTTTATCAACTGGACACATATCAGGAGCTCACTTGAATCCATCCT TGACCATCGCCTTTGCATCTCTCCGTCACTTTCCTTGGATGCAAGTCCCT GCCTATATAGCTGCCCAAGTTTCTGCCTCCATTTGTGCTTCTTTTGCTCT TAAAGGTGTCTTCCATCCTTTCATGTCTGGTGGCGTAACTGTTCCTTCCG TTGGCGTTGGACAGGCTTTTGCACTTGAGTTTCTCATTACTTTCAATCTC TTGTTTGTCGTCACCGCTGTTGCAACTGATACCCGAGCTGTAGGCGAGTT GGCAGGAATAGCAGTTGGAGCAACTGTTATGCTCAACATTCTAGTAGCTG GGCCATCTAGCGGAGGTTCAATGAATCCTGTGAGGACTCTGGGGCCAGCG GTAGCCGCAGGAAATTACAGGGATTTGTGGATATACTTGGTGGCACCCAC ACTTGGGGCTGTTGCTGGTGCAGGTACTTACACTCTTGTGAAGCTCCGAG ACGACGAAGCCGATCCACCCCGCCAAGTCAGAAGCTTCCGTCGCTAG back to top
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