Manes.01G001700.v6.1 (gene)

Overview


Name	Manes.01G001700
Unique Name	Manes.01G001700.v6.1
Type	gene
Organism	Manihot esculenta (Cassava)
Sequence length	5054

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Chromosome01	chromosome	Chromosome01:311472..316525 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
Whole Genome Assembly and Annotation of Manihot esculenta (JGI)	2015-07-22

Properties


Property Name	Value
AncestorIdentifier	cassava4.1_026199m.g.v4.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
Manes.01G001700.1	Manes.01G001700.1.v6.1	Manihot esculenta	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
gene from alignment at Chromosome01:311472..316525-

gene sequence

>Manes.01G001700.v6.1 ID=Manes.01G001700.v6.1|Name=Manes.01G001700|organism=Manihot esculenta|type=gene|length=5054bp
CTAATGTCCCATATAAGTAGGACCACCTTGTTGAGCTCTGCCTGCACTGC
TCTGTCCAATATGAGGGTTCATCTGTAGGTTTGTGTATCCACCCTGCATG
CCTGGTTCAATCCCGTATCCCCCACCAGCCTGATTAACATATCCAGCAGG
CGGCCCTCCCATATTCACTGGTGCACCACCAAGCCCTCCAAGCAGGTTAC
CAAGACCCAAAGCCGTTAAGGCCTGCCCAAGCGCTGGGTTCAGACCTTGG
GATGCCACTCCAGGACTGAAGTTCACAGATGGCCCAGACGGTGCCATCAA
ATGACCAGGGCCGTGTGCACCAGATGAGTACTTACCTTTCTTGGCTGCGT
GGTGGTATTGTGGCTGATGATGGTGATGCTGATGGTGAACTGCACCAGCA
TAACCCGTCTTGTTTGATTTTGGCCCATCAATGGCCCTCTGGCAATGCAG
GGTATGACCTTCGAACTTCTTGTGAGGCTCCTCGAGCGCCTTTTTTGCAC
TCTCAACTGACTTATACACGAATAGTGCAAAGCCCTTAGGTTTCCCAGTC
TGCTTATCAATCCCAAGCGGGCCTTCCTCAATCTCCCCGTACTGCCCAAA
GAACTCTAGAAGCTTCTCAGGCGCTAGCTCAGCTGATACATTGCTCACAA
AAATCTTCCTCTGAGTGTACTCAGATACTGCTGGCGTAGTTGGGGGTGGA
GCTGGTACAGGCCCTGCAGTGGCCAACTGACAGGACGTAATCCTATTACC
TATCTTCTTCTGAGGCTGCCTGAGGGCTTTTCGTGCCCCAGCCCGCTGCT
TGAATAATATAAAGGCATAGCCTTTGGATTTCCCTGAGACACGGTCGGTG
ACGGCCTTGCAGTCCTCTATCTCCCCGTACTTCCCAAACTCAGATTTGAG
AGTTTCAGCAGTCGTATCCCAGCCGAGACCGTGCACAAAGATCTTGCGGT
GGCCGGGGTCAGCATCCGCAATTTCACGCACAGAATCTATCAAATCAGGA
TACTTATCCACGGACTTTCTGAGGAGCCCAACCAGTTGGTCTTTCCCCAA
AGGCTCTAGAAGCTTCTCAAGAGATTCGTCGTCTTCATTTTCCTCTTCAT
CAATTGCTTGGTTTCCATTACTAGCACCTTCATTAGTACTATCCGCTTCA
GCTAATTCTGGGATTGACTGTGCAGCTTCGCTTGATGAGACTTCTAGGTT
ATGAGAGTGATGCTCTTCCGGTTGTCTTCCTTCCCCTTCTTCTTCTTCTT
CTGGTTCTTTTTCTACGTCTTCTCTCCCGTGCTCAAGTTCTTCTAGCTCC
TGTTCCTCTGCTTCTTGAGGCTCTTGTTGTTGTCGTCCAGAATCATCTTC
TACGTTCACATTTTGAGGGTCTTCTTCCTGGATTGTTTCAGGCAGCGATT
GAACCTCTTGAAGCTGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNTTTTTTTGCCTTGAATATAAATCTAAATCAA
ATAGTGTTTCTATCAATGATAGATTGGACTATTCGAATTAAATAAAATCC
TAAAAGAACTCATATTGATTCAATTTGTGGATTTTTTTTCAATTTGTTTG
CTTGAATTTGAATTTCAACTTAAAAATTTTGGTTTTAATAGAAGTATTGC
TGAAAAGATGGATCCAACACTACAACAACCCACATTCCAATCCAAGTCTT
TAGTCATAGCCCACATTCCCAGATGCAACCCTTTCCAGTACCATCCTCGC
GTGATTTCAAGTAACCACCATCCATCTTCACTATAATATCCAGCTAAATT
TTAGTGTTGGAATTCATACTTTTCAATAAAATTTCTATCGAAATCCAAAA
TCTCGAAATTGAAATATCAAAATTTGAATCTTTAAAAGAATAAAATAGAG
TTTTATAAAATAAATTTAAAATTTGAATCTTTAAAAGAGTAAAATAGAGT
TTCATAAAATAAATTTAAAATTTTTTGAATTATGTTAAAAAAAGGGAGTT
TTATAAAGGTTTTAAGGTTCGGCAGCTGAAGGTGATTTCTCCAGCCACCT
ATAAAAGGCTTTCAGCCCAAAAACGTGAGAGTTTTTCCTCCATTTTCGGG
CAGAGATAAGTCCATACCCTTTCCTAAATGTTTTTTGCTAAAATTACTTC
AATCTCTTGGAAAATTCATGAGTTTTTACCTTGTTTTTGAATATTTGAGT
TTGGACTTCAAGTCTTAGCCTTTGGAGACCTTTGAAAAACGATTTTCCTT
CTTCTTTAAGTTTTGGTTGCTGTGTTTTCCGCATTTTTCAAGAGGTGAGT
TCAATCCTTGCTTCTCTTATATTTTCTGAAGGTTTTAAACCAGTATTATA
AGTCGTTAGGGCATGCATGATTGATTATTTTAAAGTTTTAAAGTTTAAGT
TAGTTTTGAGGAGGAACGTTTTTTTCTTGGGTTTCTATTGATGCATATTG
TGTTTAGAGCAGGTTTTTGAGGTCTCTTATGTGTTAAGTATGTATGGTAG
TTTTTAGGCTGTTACATGTGAGAAAGGAAGCTTTTGGTAGCTGTGAGTGT
AGGGCAGAATCAGATTCTGCCTTGCTGGAGAACCCAGGTTCGGCGGCCGA
AGCAAGGTTCGGCCACCGAACCTGCCTATGGAGGCAGCCATTTGGCTACC
TAAACTGCCCCCGAAGGTTTGACCTTTGGATTTGTGAAGGGGTTTTAGGC
TGCCGAACTTGCCTCCAAAGGTTTTGACTTTCGGATTTGTGAGGGACCTT
CGACCGCCGAACTTGCCGCTGAAAGTCCCCTGCCCTTCCTTTTCTGCTTG
ATTTCTACGTACATTCTTATGTGTTCTTAAGGGTTTCTTGGGGGTTATTT
TAAGTATTGTAAAAGTTATGTTTGGTCCCTCCTATTAAGTCCATCTGTGT
AGGATTGGACTTGAGAGACCATAGAGGCTTGCAGTGAGATAACTGTTTCA
GTATTAGGCGAGCGTCAGCCAAAGGTGAGTAGAACTGAACTGATCTATTA
TTTTAAGAAATCAAACTTTTTAAGTATGCTCATGTATCATGAAAGCCATG
TATATGTAATTAGATTGTTTATATTAGAATTCACGAATATGATGCATTGT
ATAATCTACTGTTGTTGTGGATGGATGTTAGATGACCCACTAGCCCTCAA
GTATGTTATGATATATTATGACGGATAAGAAAAGACCAGGACTGTAATAC
CCGGCTAGACTCTGGTATCGGAATTCCTACCGTCCGGTGGAATCTCGGAT
ATCGGAAACCTCTAGAAGGGCAAAATCGTGTTTTTATAAAATGTTTTCAT
GTATTTTATGGTTTTAAGTAAGAAAGAAATTGAGTTTTGAATGAAAAAGA
CCAT

gene from alignment at Chromosome01:311472..316525-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>Manes.01G001700.v6.1 ID=Manes.01G001700.v6.1|Name=Manes.01G001700|organism=Manihot esculenta|type=gene|length=5054bp|location=Sequence derived from alignment at Chromosome01:311472..316525- (Manihot esculenta)
ATGGTCTTTTTCATTCAAAACTCAATTTCTTTCTTACTTAAAACCATAAA
ATACATGAAAACATTTTATAAAAACACGATTTTGCCCTTCTAGAGGTTTC
CGATATCCGAGATTCCACCGGACGGTAGGAATTCCGATACCAGAGTCTAG
CCGGGTATTACAGTCCTGGTCTTTTCTTATCCGTCATAATATATCATAAC
ATACTTGAGGGCTAGTGGGTCATCTAACATCCATCCACAACAACAGTAGA
TTATACAATGCATCATATTCGTGAATTCTAATATAAACAATCTAATTACA
TATACATGGCTTTCATGATACATGAGCATACTTAAAAAGTTTGATTTCTT
AAAATAATAGATCAGTTCAGTTCTACTCACCTTTGGCTGACGCTCGCCTA
ATACTGAAACAGTTATCTCACTGCAAGCCTCTATGGTCTCTCAAGTCCAA
TCCTACACAGATGGACTTAATAGGAGGGACCAAACATAACTTTTACAATA
CTTAAAATAACCCCCAAGAAACCCTTAAGAACACATAAGAATGTACGTAG
AAATCAAGCAGAAAAGGAAGGGCAGGGGACTTTCAGCGGCAAGTTCGGCG
GTCGAAGGTCCCTCACAAATCCGAAAGTCAAAACCTTTGGAGGCAAGTTC
GGCAGCCTAAAACCCCTTCACAAATCCAAAGGTCAAACCTTCGGGGGCAG
TTTAGGTAGCCAAATGGCTGCCTCCATAGGCAGGTTCGGTGGCCGAACCT
TGCTTCGGCCGCCGAACCTGGGTTCTCCAGCAAGGCAGAATCTGATTCTG
CCCTACACTCACAGCTACCAAAAGCTTCCTTTCTCACATGTAACAGCCTA
AAAACTACCATACATACTTAACACATAAGAGACCTCAAAAACCTGCTCTA
AACACAATATGCATCAATAGAAACCCAAGAAAAAAACGTTCCTCCTCAAA
ACTAACTTAAACTTTAAAACTTTAAAATAATCAATCATGCATGCCCTAAC
GACTTATAATACTGGTTTAAAACCTTCAGAAAATATAAGAGAAGCAAGGA
TTGAACTCACCTCTTGAAAAATGCGGAAAACACAGCAACCAAAACTTAAA
GAAGAAGGAAAATCGTTTTTCAAAGGTCTCCAAAGGCTAAGACTTGAAGT
CCAAACTCAAATATTCAAAAACAAGGTAAAAACTCATGAATTTTCCAAGA
GATTGAAGTAATTTTAGCAAAAAACATTTAGGAAAGGGTATGGACTTATC
TCTGCCCGAAAATGGAGGAAAAACTCTCACGTTTTTGGGCTGAAAGCCTT
TTATAGGTGGCTGGAGAAATCACCTTCAGCTGCCGAACCTTAAAACCTTT
ATAAAACTCCCTTTTTTTAACATAATTCAAAAAATTTTAAATTTATTTTA
TGAAACTCTATTTTACTCTTTTAAAGATTCAAATTTTAAATTTATTTTAT
AAAACTCTATTTTATTCTTTTAAAGATTCAAATTTTGATATTTCAATTTC
GAGATTTTGGATTTCGATAGAAATTTTATTGAAAAGTATGAATTCCAACA
CTAAAATTTAGCTGGATATTATAGTGAAGATGGATGGTGGTTACTTGAAA
TCACGCGAGGATGGTACTGGAAAGGGTTGCATCTGGGAATGTGGGCTATG
ACTAAAGACTTGGATTGGAATGTGGGTTGTTGTAGTGTTGGATCCATCTT
TTCAGCAATACTTCTATTAAAACCAAAATTTTTAAGTTGAAATTCAAATT
CAAGCAAACAAATTGAAAAAAAATCCACAAATTGAATCAATATGAGTTCT
TTTAGGATTTTATTTAATTCGAATAGTCCAATCTATCATTGATAGAAACA
CTATTTGATTTAGATTTATATTCAAGGCAAAAAAANNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCAGCTTCAAGAG
GTTCAATCGCTGCCTGAAACAATCCAGGAAGAAGACCCTCAAAATGTGAA
CGTAGAAGATGATTCTGGACGACAACAACAAGAGCCTCAAGAAGCAGAGG
AACAGGAGCTAGAAGAACTTGAGCACGGGAGAGAAGACGTAGAAAAAGAA
CCAGAAGAAGAAGAAGAAGGGGAAGGAAGACAACCGGAAGAGCATCACTC
TCATAACCTAGAAGTCTCATCAAGCGAAGCTGCACAGTCAATCCCAGAAT
TAGCTGAAGCGGATAGTACTAATGAAGGTGCTAGTAATGGAAACCAAGCA
ATTGATGAAGAGGAAAATGAAGACGACGAATCTCTTGAGAAGCTTCTAGA
GCCTTTGGGGAAAGACCAACTGGTTGGGCTCCTCAGAAAGTCCGTGGATA
AGTATCCTGATTTGATAGATTCTGTGCGTGAAATTGCGGATGCTGACCCC
GGCCACCGCAAGATCTTTGTGCACGGTCTCGGCTGGGATACGACTGCTGA
AACTCTCAAATCTGAGTTTGGGAAGTACGGGGAGATAGAGGACTGCAAGG
CCGTCACCGACCGTGTCTCAGGGAAATCCAAAGGCTATGCCTTTATATTA
TTCAAGCAGCGGGCTGGGGCACGAAAAGCCCTCAGGCAGCCTCAGAAGAA
GATAGGTAATAGGATTACGTCCTGTCAGTTGGCCACTGCAGGGCCTGTAC
CAGCTCCACCCCCAACTACGCCAGCAGTATCTGAGTACACTCAGAGGAAG
ATTTTTGTGAGCAATGTATCAGCTGAGCTAGCGCCTGAGAAGCTTCTAGA
GTTCTTTGGGCAGTACGGGGAGATTGAGGAAGGCCCGCTTGGGATTGATA
AGCAGACTGGGAAACCTAAGGGCTTTGCACTATTCGTGTATAAGTCAGTT
GAGAGTGCAAAAAAGGCGCTCGAGGAGCCTCACAAGAAGTTCGAAGGTCA
TACCCTGCATTGCCAGAGGGCCATTGATGGGCCAAAATCAAACAAGACGG
GTTATGCTGGTGCAGTTCACCATCAGCATCACCATCATCAGCCACAATAC
CACCACGCAGCCAAGAAAGGTAAGTACTCATCTGGTGCACACGGCCCTGG
TCATTTGATGGCACCGTCTGGGCCATCTGTGAACTTCAGTCCTGGAGTGG
CATCCCAAGGTCTGAACCCAGCGCTTGGGCAGGCCTTAACGGCTTTGGGT
CTTGGTAACCTGCTTGGAGGGCTTGGTGGTGCACCAGTGAATATGGGAGG
GCCGCCTGCTGGATATGTTAATCAGGCTGGTGGGGGATACGGGATTGAAC
CAGGCATGCAGGGTGGATACACAAACCTACAGATGAACCCTCATATTGGA
CAGAGCAGTGCAGGCAGAGCTCAACAAGGTGGTCCTACTTATATGGGACA
TTAG