Analysis

Name Program Sourcesort descending
RNA Seq Cohn et al, 2014 Responses to Xanthomonas Xam668 Cohn et al, 2014
Whole Genome Assembly and Annotation of Manihot esculenta (JGI) http://phytozome.jgi.doe.gov/pz/portal.html#!bulk?org=Org_Mesculenta_er JGI Manihot esculenta assembly/annotation v7.1 (305)
RNA Seq Munoz Bodnar et al, 2014 Responses to Xanthomonas Munoz Bodnar et al, 2014
Cassava v6 WGS Bredeson 61 Phytozome 2016 Downloaded from PhytozomeV11: Mesculenta_305.vcf.gz, Bredeson et al, 2016, 61 individuals PhytozomeV11: Mesculenta_305.vcf.gz
Cassava v6 WGS Bredeson 61 HC Internal reanalysis using HaplotypeCaller (GATK), 61 individuals Sequencing wild and cultivated cassava and related species reveals extensive interspecific hybridization and genetic diversity.