Analysis

Namesort ascending Program Source
Whole Genome Assembly and Annotation of Manihot esculenta (JGI) http://phytozome.jgi.doe.gov/pz/portal.html#!bulk?org=Org_Mesculenta_er JGI Manihot esculenta assembly/annotation v7.1 (305)
RNA Seq Munoz Bodnar et al, 2014 Responses to Xanthomonas Munoz Bodnar et al, 2014
RNA Seq Cohn et al, 2014 Responses to Xanthomonas Xam668 Cohn et al, 2014
Cassava v6 WGS Bredeson 61 Phytozome 2016 Downloaded from PhytozomeV11: Mesculenta_305.vcf.gz, Bredeson et al, 2016, 61 individuals PhytozomeV11: Mesculenta_305.vcf.gz
Cassava v6 WGS Bredeson 61 HC Internal reanalysis using HaplotypeCaller (GATK), 61 individuals Sequencing wild and cultivated cassava and related species reveals extensive interspecific hybridization and genetic diversity.